Kwoniella shivajii: 87955934
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Entry
87955934 CDS
T10982
Symbol
IL334_003803
Name
(RefSeq) uncharacterized protein
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
ksh Kwoniella shivajii
Pathway
ksh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
87955934 (IL334_003803)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksh03032
]
87955934 (IL334_003803)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87955934 (IL334_003803)
DNA replication proteins [BR:
ksh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
87955934 (IL334_003803)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
87955934 (IL334_003803)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
TPR_2
TPR_7
HHH_5
TPR_14
Viral_NABP
DUF7023
Lin-8
Motif
Other DBs
NCBI-GeneID:
87955934
NCBI-ProteinID:
XP_062791580
LinkDB
All DBs
Position
5:join(111063..111139,111222..111234,111293..111363,111432..111551,111618..111741,111809..111946,112006..112122,112201..112293,112346..112712,112765..113678,113743..114102)
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AA seq
797 aa
AA seq
DB search
MGISGLLPLLKEITVNGHISEFKGKRLAVDAYVWLHKGAFGCAEDLVKGKKTTKFVDYAM
HRVRLLRYHGITPFIVFDGGPLPAKKGTEVSRAKSRAENLERARSMESQGRWREARDFYT
RCLDITPEMAFQLIKALRVENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGCR
QVVFKLDGNGQCVWIHRDNLATIRDFPMHGWTDVEFRRMAMLSGCDYLDSIAGIGLKKAH
ALMRRFKTVEKLLQHIRLEGSMTIPQDYLASFAQAELAFIHQRVYCPQQCRLVPLNDFPE
GGLGDSDERWIGLDVDSEIAKGMAKGDIHPETREPIIDEWPDYQPTSRSKPLTENYGRVN
INVSAGPMDAFITRMKKPKPLPRPVGTFGSGPSRLSDQITERHFAPAAVSREFPISTGVT
KKSKFFSKPSKREVTPELDEPLHWEEESEEVESQPVAGPSRFQSSPARSPSPAISSIRGG
ESPARSVFSGHVLTSPGCLLSSPPDSPSQGIPFSTPLKKDKRVREDTPPSPTGASAGETV
LVTASSQIIETATEYDYDMEVDVRHHEIIEVETPVRRERKSMSRLSTMVIPNSSSPATSF
VPESQPRPNRRLQSFASSDTISEEEIVTPSLDQISQKKRKRVKQEVEDEVVDDNERKNIE
RAKAVAQNWRAKYSFGHTSSSPAPGDASQTPNSIKRTRSDPSPRSRVEPIKRATLPITSQ
ASRILIPRSTNVPESQPSTPSTRKEDRNLDIIKDQEDLVIPFSSSPVSAISNEENIPSTA
VGGKTWTKLQKYKFAKR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatcaggtctattaccccttctcaaggagataacggtcaatggccacatatca
gaattcaaaggtaaaagacttgcagtagacgcgtacgtgtggcttcataagggtgctttt
ggttgtgcggaagacttggtgaaagggaaaaaaacgacaaaattcgtcgactatgcgatg
catagagttcgcctactccgttaccatggtataacaccatttatagtattcgatggaggt
cctttaccagctaagaaaggaacggaagtgtcaagagcaaagtcacgagcggagaatctc
gaaagggcacgatcaatggaatcccagggtagatggagagaagcaagagatttctatact
agatgtttggacataaccccagaaatggcttttcaacttatcaaggcattacgagtggag
aatgtcgattatgtcgttgcgccgtatgaagcagatgcccaactgtgtttcctagaaaga
gaaggatatgtcgatggtattataacggaagattcagatttattggtatttggatgtcgc
caggtcgtattcaaactcgatggtaacggacaatgcgtctggatacatcgagataatcta
gctactatacgtgatttcccaatgcacggatggacagatgttgaattcagacgaatggcg
atgctttccggatgcgactacctcgactcaatcgctggtattggattgaagaaagctcac
gcattgatgaggcggttcaaaactgtcgaaaagctccttcagcatatccggctcgaagga
tcaatgaccattcctcaagattatcttgcttctttcgctcaagcggaattagcgttcatc
caccaaagggtatactgcccacaacaatgtcgtcttgtaccgcttaacgactttcccgaa
ggaggattaggcgacagtgatgagaggtggattgggcttgatgtagactctgagatagcg
aaaggaatggcaaagggagacatacatcccgagaccagagaaccgataatcgatgaatgg
ccggattatcaaccgacatctaggtcaaaacccctcaccgagaattatggaagggtcaat
ataaatgtttccgccggacccatggatgcttttattactagaatgaagaagccaaagcct
cttccaagaccagtcggcacttttggatctggaccgtcgcgactttcggaccaaatcacg
gaacgacatttcgctcccgcagctgtttcaagggaatttcctatttcaacaggtgtaaca
aagaaaagcaaatttttctccaaaccttcaaaacgagaagtcactcctgagcttgatgaa
ccgttacattgggaagaagaaagtgaagaagttgagtcacaaccagttgctggaccatcc
cgttttcaatcttcgcccgctcggtcacccagtccagcaatctcttcaatcagaggtggg
gaatcgcccgcccgatcagtcttctcaggccacgtccttacctccccaggatgtcttctt
tcaagtccgccagattctccttctcagggtattcctttctcgactcccctgaagaaagac
aagagggtcagggaagacactccaccttcgccaacaggagcttcagcaggcgagaccgta
ttagtaactgcctcttctcaaattattgaaacagcgacagagtatgactacgatatggag
gtggacgttagacatcatgaaatcatcgaagtcgaaactccggtgagaagagaaaggaaa
tcaatgtcaagattatcaactatggtcatacccaattcttcatcaccagcaacatctttc
gttcctgaatctcaacctcgccctaatcgaagactgcaatctttcgcatcgagcgataca
atatcggaagaagaaattgtcacgccgtctctggatcaaataagccaaaagaagaggaaa
agagtcaaacaggaagtcgaggatgaggtagtagacgacaatgaaaggaagaacattgaa
agagctaaagctgtcgctcaaaattggcgagctaagtactcttttggacatacttcatcc
tcaccggcgccaggtgatgcttcacaaactcccaatagcatcaaaaggaccagatccgat
ccttcgccccgatcaagagttgaacctatcaaacgcgcaactctgcctataacttcacag
gcttctcgcatcttaattcctagatccacaaatgttccggaatctcaaccgagtactccg
tcaacgagaaaagaggatcgaaatctcgacatcatcaaggatcaagaggacctcgtcatt
cccttcagctcatcaccggtatctgccatttctaacgaagagaacatacccagtacggct
gtaggagggaagacttggactaaattgcagaaatacaaattcgcgaaaaggtaa
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