Kwoniella shivajii: 87955940
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Entry
87955940 CDS
T10982
Symbol
IL334_003809
Name
(RefSeq) serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ksh Kwoniella shivajii
Pathway
ksh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
87955940 (IL334_003809)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ksh01007
]
87955940 (IL334_003809)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksh03016
]
87955940 (IL334_003809)
Enzymes [BR:
ksh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
87955940 (IL334_003809)
Amino acid related enzymes [BR:
ksh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
87955940 (IL334_003809)
Transfer RNA biogenesis [BR:
ksh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
87955940 (IL334_003809)
Prokaryotic type
87955940 (IL334_003809)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
87955940
NCBI-ProteinID:
XP_062791586
UniProt:
A0ABZ1D1K8
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All DBs
Position
5:join(125034..125550,125599..126403,126661..126754,126890..127249)
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AA seq
591 aa
AA seq
DB search
MIARSRLKICQIVRRHYATHTTLKGPLIGIKPSAPQPTSSSNSSSGSNSGSGSGSGSNQA
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSLSSSSTLPKPRIDYNSILADPGYTTL
NAIQRKSPLKPDHLLHLSRLRETQLLLLSKLSTIRNKQKEIGSLIKSGGILGEKEELKEQ
AKKLKIRIKSYDSNLIETENELLELSLILPNFSHPNSPVGSEENAIILESFGPTENTKTK
TKQEVETNRDHVSFCNHFGLLDNEACSTTSGSSWPFLIGTLSLIEQSLIQYSLSIAIRNG
FRPVIPPDVIKEDLAWRCGFHPRDSQDNPSTQTYHLTPPSTNGDNSPRLCLAGTSEIPLA
GLFANRLFNEEDLPKKVVGIGRAFRAEAGARGSDTRGLYRVHQFTKLELFSVTSQDESEN
MMEEIRGVQKEIAQGLGLNVRVLDMPTEELGASAYRKYDMEAWMPGRGKWGEITSTSNCT
DFQSRRLSITYRPSPSSSPHSNAKVEGSDVSSPPPAPNDSHNGPLPFAHTLNGTAAAIPR
LIVALIENGIRFKEDGSGGYDGLDLPKALQRFWIGGDNVGERKEKGTIRWV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgcgctcacgtctcaagatctgtcaaatagtacgaagacactatgcgactcat
acaacgttaaaagggcctttgataggtatcaaaccatcagcaccacagcctacctcatca
agcaattcgagttctggatctaactctggatctggctcaggatcaggatcaaatcaagca
tcctcctcctcttcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatca
tcatcatcatcatcatcatcatcatcatcatcatcatcatcgttatcatcatcatcgaca
ctacccaaacccagaatagattacaacagtatattagctgatccaggatacactacgttg
aatgctattcaaaggaaatcacctctgaaaccagatcatctattacatttatcaagatta
cgtgaaactcaattactgctgttatccaaattatctaccatcagaaataaacagaaagaa
ataggttcattgatcaaatcaggtggtattttaggagaaaaagaagaattgaaagaacaa
gctaaaaaattgaaaatacgtataaaatcatatgactcaaatctgattgaaactgagaat
gaattattagaattatcattgatcttacctaatttctcacatccaaactcgcctgttgga
tcagaagaaaatgccattatattagaatcgttcggtcctactgaaaataccaagaccaag
actaagcaagaagtcgaaacgaatagagatcatgtttcgttttgcaatcatttcggttta
ttagataatgaagcttgttcaactacatccgggagttcgtggccttttttaattggtaca
ttgtctttgattgaacaatctttaatacaatattcactttcaatagcaatcaggaatgga
tttagacctgttataccacctgatgtaataaaagaagatttagcttggagatgtggtttt
caccctcgtgattcacaagataacccttccactcaaacatatcacttgactccaccttcg
acaaatggagataattcacctagattgtgtttagcgggtacatcagagattccgttggct
ggtctattcgctaatagattattcaacgaagaagatttacctaaaaaagttgtggggata
ggtagagcttttagagctgaagcaggtgcaagaggttcagatacaagaggtttatataga
gtacatcaattcactaaattggagttattcagtgttacttcgcaggatgagagcgagaat
atgatggaggagattagaggggttcagaaagagattgctcaaggactgggtttgaacgtg
cgagtccttgatatgcctactgaagagttgggcgcttcggcatataggaaatacgatatg
gaagcttggatgcctggtagaggcaagtggggcgagataacttcgacctcaaactgtaca
gacttccaatcacgtagattatcaataacttatcggccgtccccatcgtcctcgccccac
tctaatgccaaagtcgaaggaagcgacgtatcatcaccgccgcccgcaccaaacgacagc
cataatggaccattaccattcgcacacactttgaacggtacagcagctgccatacccaga
ttgatcgttgctctgatagaaaatggaattaggtttaaagaggatggttcggggggttat
gatggattggatctacctaaagcgttacaaaggttctggattggtggggataatgtcggt
gagaggaaagagaaaggtaccataagatgggtctag
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