Kwoniella shivajii: 87955983
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Entry
87955983 CDS
T10982
Symbol
IL334_003852
Name
(RefSeq) uncharacterized protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
ksh03015
mRNA surveillance pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87955983 (IL334_003852)
09122 Translation
03013 Nucleocytoplasmic transport
87955983 (IL334_003852)
03015 mRNA surveillance pathway
87955983 (IL334_003852)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87955983 (IL334_003852)
03041 Spliceosome [BR:
ksh03041
]
87955983 (IL334_003852)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
87955983 (IL334_003852)
Spliceosome [BR:
ksh03041
]
Common components
Common spliceosomal components
Cap binding complex
87955983 (IL334_003852)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
SlyX
Motif
Other DBs
NCBI-GeneID:
87955983
NCBI-ProteinID:
XP_062791629
UniProt:
A0ABZ1D0K3
LinkDB
All DBs
Position
5:complement(join(258401..258547,258718..258959,259062..259679,259738..259925,260044..260513,260578..260808,260874..261032,261090..261245,261409..261640,261751..261848,261928..262058,262117..262261))
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AA seq
938 aa
AA seq
DB search
MSYQNSFNPMGFGNPYAQAYGGQPGFGGSPGGYGGGRGRGGGGGGRGRDDRRGGRGRGNY
GGGGGGNRDRPPIPENSNSRLKKMVIKLGDDEQYDPIDDPHRLARALKRTWREGSSGVCE
GFRISVTQQPQKHSYLVILLLSLSRRNISGVKTEEGVEAQLGEKRKADDEEDIEFGREII
EDLSRALRGWVEGREWQNVRLGLQFFSLLVPAGLITPSSLLGVYKSLLAVLEEVGGGGDR
AERAVRAVGEGLIRSGKVLYENYPDDVENLITSIEGYIIGRRNEVKSLINPLSPILPIGN
ESSPNPDTLDNFLSALHALRANAFNPPECLPRYWESSILDENTTQSDPYELATVSMPPEM
YAVDAEELDKGEGRIGNLRLFAEEVVPSPESLDGWVLQSLVLDLINIYEVNRKECASLLL
SLRKYFPSKTFKPTHPPEDVDSDESTPVSTWSPESLAISTLLNAMLTLPKSAYKSIYYGS
VVTELCKLSPNTVAPPVGRAVRKVFGYLGNEGLDVEISRRVAEWFSLHLSNFGFQWMWKE
WIPELELPASHPRRAFMRRVTELEVRLAYYDRILDTLPEAMAVEGAGVISSAPPEPIWPY
EIEDHPLHSEATEILGLFRSKTSTTDVQAHLEQLPNSKSGPSEPLYPNIRKMVFETILHL
GSRSFSHFLNATERYLETLRYLTSDQSSRRILLEGVWSYWKYSTQLRLVTIDKYLQYGIL
EGLDVIEFLFDDDDVEDQVEESDGWTDGWKWEILKMTIEKHVGRTEAIKKRLRLIEKEDE
MARARRAAELLEKGGDVGAENGEEENIVEDPRPEGSQAFNDTQTSLDIQASRLEKVLMST
MKLFVLSLLPQEEGSVNQGLKGVLALLQSGEEALWSTRAKWGWYKQFLRLWSAHLIPLAE
PIESSIFDPISKSQSVSDDLDQRAQDLVRGVWNSSLEI
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaaaatagcttcaatccgatgggattcggtaatccttatgctcaggcttat
ggaggtcaacctgggttcggtggaagtccagggggttatggaggtggtagaggcagagga
ggtggaggaggcggtcgaggaagagatgatagacgggggggaagaggaagaggtaattat
ggtggtggaggagggggaaatagggatagacctcctatacctgaaaattcgaattcaagg
ttgaagaaaatggtaatcaagcttggtgacgatgagcaatatgacccaattgatgatcct
catcgacttgctagggctttaaaaagaacttggagagaaggctcttctggagtttgtgaa
gggttcagaataagcgtaactcaacaacctcaaaaacattcatatctagtcatcctcctt
ctttccctctctcgtcgaaatatatctggagtcaaaacggaagaaggagttgaagctcaa
ctcggagagaagagaaaagcggatgatgaagaggatatcgaatttggacgcgaaataata
gaagatctcagtagagctctgagaggttgggtagaagggagagaatggcagaatgtcaga
ttaggccttcaatttttctctctccttgtgcccgccggtctgatcaccccttcttcacta
ctaggcgtgtataagtcgctgcttgctgtgcttgaagaagtaggtggaggtggtgataga
gccgaaagagctgtccgagcagttggtgaaggtttaatacgttccggcaaagtattgtat
gaaaactacccagatgacgtcgaaaatctgatcacttccatcgaaggttatatcattggc
agaagaaatgaagtgaaatctctcatcaatccgttatcacctattttaccgattggaaac
gaatcttctcccaatccagatacacttgacaatttcctttctgctcttcatgctctacga
gcgaatgcattcaacccaccggaatgtttacctcgatattgggaatcctcaattctcgat
gaaaacacaacccaatctgatccatacgaattggcgacggtttcaatgcctcctgagatg
tatgctgttgatgctgaagaattagataaaggtgaaggaaggattggtaacctcaggcta
ttcgctgaagaggttgttccttcacctgaatcccttgacggatgggtgttgcaaagttta
gtgttagatctcataaatatatatgaagttaatcgaaaagaatgtgcatcattattatta
tcattacgaaaatatttcccatcaaaaacattcaaaccaacacatcctcctgaagacgta
gattcagatgaatcaactccagtatcgacttggtcaccagaatcattggcgatatcaaca
ttattaaacgcaatgttgacattacctaaatcagcatataaatcaatttattacggttcg
gtcgtaactgaattatgtaaattaagtcctaatactgttgctccacctgtcggaagagcg
gtcaggaaggttttcggttatttgggtaatgaaggtttagatgttgaaatttcaagaagg
gttgcagaatggtttagcttacatttaagtaatttcggtttccaatggatgtggaaggaa
tggatccctgagctcgaattacccgcctcacatcctagacgagcattcatgagacgtgtg
actgagctcgaagtgaggctggcatattacgatcgaatccttgacactttacccgaagca
atggcagtggaaggagcaggagtcatctcttctgcacctcctgaacctatttggccatac
gagatagaagatcatcccttgcactccgaagccacagaaatccttgggttgttccgatcg
aagacatccacaacagatgttcaagctcatctggaacagctaccaaattcgaaatctgga
ccatccgaaccattgtatcctaatattcgaaagatggtattcgaaacgatacttcattta
ggttcgagatcgttttcacatttcttaaacgccactgaaaggtatctcgaaacgttaaga
tatcttacctctgatcaatcatccagaaggatcttattggaaggagtatggtcatattgg
aaatattcgactcaactgagattagtaacgattgataaatatttacagtatggtatattg
gaaggattagatgtaattgaatttctctttgacgatgatgacgtcgaagatcaagttgaa
gaaagtgatggttggacagatggatggaagtgggaaatccttaaaatgaccattgagaaa
catgtaggtaggacagaagcgatcaagaaaagattgagattgattgaaaaagaagatgaa
atggctagagctagaagagctgctgaacttttagaaaaaggtggtgatgtaggtgctgaa
aatggtgaagaggaaaatatcgttgaggatcctcgcccagaaggttcacaggcattcaac
gatactcaaacttcacttgacatccaagctagtagacttgaaaaagtattaatgtccaca
atgaaattattcgttctgtcattattaccacaagaagaaggaagtgtaaatcaaggatta
aaaggtgttttggcattgttacaaagtggtgaagaagctttatggtcaactagagctaaa
tggggctggtataagcaattcttaagactttggtcagcacatctgataccattagcagaa
cctattgagtcatctatatttgatccaatatcaaaatcgcaaagtgtatctgacgattta
gatcaaagagctcaagatttagttagaggtgtttggaatagttctttggagatttga
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