Kwoniella shivajii: 87956014
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Entry
87956014 CDS
T10982
Symbol
IL334_003883
Name
(RefSeq) uncharacterized protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87956014 (IL334_003883)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87956014 (IL334_003883)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87956014 (IL334_003883)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87956014 (IL334_003883)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
87956014 (IL334_003883)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
87956014
NCBI-ProteinID:
XP_062791658
UniProt:
A0ABZ1CYV7
LinkDB
All DBs
Position
5:complement(join(350729..351094,351174..351489,351581..352753,352805..353016,353069..355203,355262..355411,355465..356520,356588..356707,356767..356865,357091..357226))
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AA seq
1920 aa
AA seq
DB search
MFGGTSKWGQNNQQQQQPQQQQGGLFGGGTAGGFGQQQPQQQNTGGFGQNNAGGFGQPAQ
QNTGGGLFGGGTANTSTFGGFGANTQQQPQQQSNAFGASRPTFGATGGSTFGQPQQQNTG
GGLFGNTNTNTGFGSTSNTSTGGLFGAKPATTSTFGSGTTSGLFGAKPTTTFGATGNQEV
LKGPNELQTYRPEAPSAPPPAQGTASPAYFPTWQGDPSSTTMGKEGPPHLFHSVTGMVPY
RGVSWEELRALDYQQNRKEATQQPANTFGASTGGFGQPASTGFGQTQPQTSTFGTKPAGG
MFGSTGSTGFGSTSTGFGSTPTNTGGGLFGQQQQQQQQPQQNQSPFGQSTSGTAGSLFGQ
PAQPQANTGGGLFGNTSVFGSQNNQQQPQQQQQQAGTSTFGGFGAAKPAFGAGTTGGFGS
TAAPTGTSTFGQTGATGTSSFGGFGQTQQPQQQQQQPATGGGLFGGGGGFDSQPQQNTGG
LFGQTAQQQQPGAGGFGAPKPAGGLFGSTPAPAATNTGFGGFGQTANNQPSSGGLFGSTN
NAATQSSSLFGQQPQQQNAQQPAPGGLFGSTSTGGGLFGAKPATATPGTGGLFGQTQPVQ
LPAQGGGLFGNTGSTGGLFGGTSNNLGQQNQQQNNSLAKPAGGLFGGGGGLFGQQNQQQQ
PAQTGNTGGLFGTLGQSQPASTGLFGSTNAQPAQQSNFGGSMFGGLGQSTGQQQQQQPSL
TASIDQNPYGNNQLFQYTGQKLEYGSQSKKPALPPLTASSYRLTPSTKGKISKLRGFASP
LAGSQSPARSNTPLVLASSPARSSLLNSPAAPDRYKGLTDTALTPNAFVPRPSIKKLTVT
PRVFNGAGNGDQLESVLGKSALKSSTGSLAQPTPERGFIAPGSPATLLFNPPAANGISRS
EHTDSPVRRSAPIAESSLRVSGSERAPKKGEYWCKPKLEKLRQLSKQELSELHNFTAGRR
GFGEVTFLEPVDLTLAPLDDLLGTIVVFDQSELSVYPDDYPAKAPEGQGLNIPARITLEN
VFAHDKATKEPIRDSSDPRFVRFLKRVKNIPNTEFVSYTDDGTWSFKVEHFSRYGIDESD
EDDAEPQPKKHVRQRSAATYERTPSRTPESMQDEDEDMLPPTKGLRDFSEGEHDSGLEDD
SFEEEETYENGDEEFDEPDDIPEQIIPTWDQPLKSKIGVEGMKKLREMQSSFFAAPPQKV
DTKKRDMRERNKDSFFGEAGEDIESLDNRAVKRTSFGETRVSPPKLRQPRKYARVLEDDS
VIKGDEGIRVDAGLALGRSFRCSWGPKGELVHFGKITAPGATIIPESNAVVHIEKVETLA
DETRSENAKAKKLLALHLENTIVETLDGIPYAAIDTTIRFRDFASRFDAGDRSHEASVFR
LGVALFDELDLRLPSDSPEELVERIASIRRKLALSNWLEDAVSPAVDSDLIKSGEDRPAK
AFALLSGHQVERAVQSALDGGDMRLATLISQAGGEEIFREELMRQLEDWQKYKVNPLIAK
GYRKLYALLAGITDISPDDPSKGSDGCPNVLIAEGLDWKRALGLQLWYGNRFEDTISDVV
SAYSASLDSTHPPAKPLPAYLEIPAHLPRNWNSPYEPTDVLYNLIKLYSNREISLDQILR
SRDTSPSPFDVRLSWHLYILLSRVLEKRDFEDREGEGYSASADKLTEGFASQLELNGEWT
YAAFVSLHLETSIGREQSIRALLFRHPYPTSDEQDFLTQTLKIPIVWIHESRAASLSSSG
DAWGEYHALLKAELWNRAHKVLIAKLAPEAVLRDDKVLLRKLCENLDGKGAEGWEYGGKL
FLDWADLTTDTARILTSVVQAGSHPDPRESTTLSDHSRNLPRVLQLLPALFPDKKDIQQV
AGLSEMLSPLYQLAGLLHSAGYINKQSVPTYLVDEDRLDLLQSAAFESFNKSLDSLPVSA
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggaacctcaaaatggggtcaaaataatcaacagcagcaacaacctcaacag
caacaaggaggcttgtttggcggtggaactgcaggagggtttggacaacaacaaccacaa
caacaaaatacaggcggattcggccaaaacaatgctggtggattcggacagcctgctcaa
caaaatacgggaggaggtttatttggaggaggtacagcgaatacttcgacatttggtgga
ttcggtgcaaacacccaacaacaaccacaacagcaaagtaatgcttttggtgcatcaaga
ccaacttttggagctactggaggtagtactttcgggcaaccacaacagcagaatactggc
ggaggacttttcggtaacaccaacaccaataccggctttggctctacttccaacacttct
accggtggcttattcggtgccaaacctgctaccacttcaacatttggatctggaaccacg
tcagggctcttcggcgctaaacccacaactacattcggtgctaccggaaatcaagaagtg
ttgaaaggtcctaatgagttgcagacatatcgtcccgaagccccttcggctccaccgcct
gctcaaggtacggcttctccggcttacttcccaacatggcaaggtgatccctcatccact
accatgggcaaggaaggtccacctcatctgttccattcagtaactggtatggtaccgtat
cgaggagtatcatgggaggaattacgagctttagattatcaacagaatcgaaaggaagca
acgcaacaacctgccaatactttcggcgcttcaactggaggatttggtcaacctgcctcg
acaggattcggtcaaacacaaccacaaacatcgacctttggaaccaaacccgccggaggg
atgttcggaagcacgggaagcaccggttttggatctaccagcaccggttttgggtcaacc
ccgacaaataccggtggaggactgttcggtcaacaacagcagcaacagcaacaaccacaa
caaaaccaatctcccttcggtcaatcaacttctggtaccgccggcagtcttttcggtcaa
ccagctcaacctcaagcgaatactggtggtggattgttcggaaataccagtgtgtttggt
agtcaaaataaccaacaacagcctcagcaacagcaacagcaagctggaacaagcacattt
ggaggctttggggctgccaaacctgctttcggagctggaacaactggcgggtttggatcc
actgctgcgcccaccggaacgagtacatttggtcaaactggtgctactggaacaagcagt
ttcggaggctttggacaaactcaacaaccgcaacagcaacaacaacaaccggctaccgga
ggtggattatttggtggtggcggtggcttcgattcccaaccgcagcaaaatacgggcggt
ctatttggccaaactgctcagcaacaacagcctggagctggtggattcggcgcacctaag
cctgcgggtggtctgtttggaagtacgcctgcaccagcggcaactaacaccggctttggt
ggcttcggtcaaacggcaaacaaccaaccttcttcgggtggtcttttcggcagcaccaat
aatgccgcaacccaatcttcttcccttttcggccaacaaccccaacagcaaaacgcccaa
caacccgctcccggtggcctctttgggagcacttctacgggtgggggcctgttcggagct
aaacctgctactgccactccaggtactggcggtttgttcggtcagacacagcctgttcag
ctacctgcccagggaggaggcttgttcgggaacactggatccaccggaggtctctttggc
ggtaccagtaacaatctagggcaacagaaccagcaacagaacaactcgcttgccaaacca
gccggaggtctgtttggaggaggcggcggtctcttcggacagcaaaaccagcaacaacaa
cctgctcagacaggtaatacaggtggactcttcggtactcttggtcagtcacaacctgct
tccactggtctcttcggcagtaccaacgctcaacccgctcagcaatccaattttggcggc
agtatgtttggcggtctaggtcaatcgactggacaacagcaacaacaacaaccctcactt
accgcctccatcgatcaaaacccatatggcaacaatcaacttttccaatatactggtcag
aaactcgaatacggatcacagtctaagaaacctgctcttccaccccttaccgcctcatct
taccgactcacgcctagcaccaagggaaaaatcagcaagctgagaggtttcgcctctcct
ctcgccggttcccaaagtcccgcacgatcaaacactcctcttgttttggccagctcacct
gcccgatcgagcctactcaattctcccgctgcgcctgatagatataagggtttaaccgat
accgcattgacacccaacgctttcgtacctcgtcccagcattaaaaagttgactgttaca
cccagggtattcaatggagctggaaatggtgatcagcttgaatcagtcctcggcaaatca
gctttgaaaagctcgacaggtagtctcgctcagcctacccccgaacgaggtttcatcgct
cctgggagtcccgctactctactcttcaatcctcctgctgctaatggcatctctcgatct
gagcataccgactcacccgttcgacgctcagcgcccatcgctgaatcgtcccttcgagtc
tccgggtcagagcgcgcacctaagaaaggagaatactggtgtaaacctaaattggaaaag
cttcgtcaattaagcaagcaggaattatctgaacttcacaatttcacggctggtcgacgt
gggtttggtgaagtaacgttcctcgagccggtcgatctgactctggctcctctcgacgat
ctgcttggtaccattgttgttttcgatcaatctgaactatcggtttatcccgatgactac
cctgctaaagctcccgaaggacaaggccttaatatacccgctcgaattactttagaaaat
gtcttcgctcatgataaagctaccaaagaacctatccgagattcttctgaccctagattt
gttcgattcttgaagcgggtcaagaacattccgaacactgagtttgttagttacaccgac
gatggaacatggtctttcaaagttgaacatttcagcagatatgggattgatgaaagcgac
gaagatgatgctgaacctcaaccaaagaaacacgttcgacagagaagtgcagcgacttat
gagagaactccatctagaactcctgaatcaatgcaagatgaagatgaggatatgttaccg
cctactaaaggcttacgggatttttccgaaggggaacatgattccgggctagaggacgat
tctttcgaggaagaagagacatatgaaaatggagatgaggaatttgacgaaccggacgat
atacctgagcaaataataccaacgtgggatcaacccttgaaaagcaagatcggtgttgaa
ggaatgaaaaaactacgagaaatgcagtcttcttttttcgctgctccaccgcagaaggtt
gataccaaaaaaagggatatgagagagagaaacaaagactcgttttttggtgaagccggg
gaggacattgaatcgcttgataaccgggctgtcaagcgcacctccttcggcgaaactcgt
gttagcccaccgaaacttcgacaacctagaaaatatgcccgtgtacttgaagatgacagt
gtaatcaaaggagatgaaggcatcagagttgatgctggattagctctcggaaggtcattc
agatgttcttggggacccaaaggcgaattggtgcatttcggaaagattactgctcctgga
gcgaccataattcccgaatcaaacgccgtggtacatattgaaaaagtggaaactctcgcc
gatgaaacgaggtctgaaaacgctaaagccaagaaactgcttgcattacatctggaaaac
accatcgttgagaccctggacggtataccttacgccgcaatcgacactactattcgattc
cgggattttgcttctcgctttgacgctggcgatcgatcgcacgaagccagcgtgttccgt
ctaggcgtcgctcttttcgatgaacttgatctacgactcccttccgattcacccgaagaa
ctagtggagcggatagcttctatcagacgaaaattggctctctcaaactggctagaagat
gctgtttctccagccgttgattcagacttgataaaaagtggagaagatcgacctgcgaaa
gcattcgctcttttgagcggacatcaagtagaacgagccgttcaatctgctctggatggc
ggtgatatgagacttgcaactttgatttcacaagccgggggagaagagatattccgagaa
gagttaatgagacaattagaagattggcaaaaatacaaagtcaatcctcttatagctaaa
ggatatcgaaaactctacgccctcttagccggtatcactgatatctcccctgatgatcct
tcaaaagggtctgatggatgtcctaatgtcctcattgctgaaggtttagattggaaacgg
gcattaggtctacaactatggtatggtaatcgatttgaagatactatatcagatgtcgtc
tcagcatactctgcatctctcgattcaactcatccccctgccaaaccactacctgcctat
ctggaaatcccagcccacttaccaagaaattggaattctccctacgaacccacagacgtc
ttgtacaacttgatcaaactttattcaaacagagaaatctcattagatcaaatactgcgt
tcacgtgatacttcaccatcaccatttgatgttagactatcatggcatttatatatactc
ctctctagagtgttggagaagagagattttgaagatagggaaggagaggggtattctgct
tcagcggataaattgacagaaggtttcgctagtcagctggagctcaatggcgaatggacc
tatgccgcttttgtctcattacatcttgaaacatccataggtcgagaacaatcaattcga
gctctattattccgccacccctacccaacttcggacgaacaagattttcttactcaaaca
ctcaaaataccaatcgtatggatacacgaatcccgagctgcatccctttcttcatccgga
gatgcatggggagagtatcacgctctactcaaagctgaattatggaatcgagcacacaaa
gttttgattgccaaattagctcccgaagctgttttgagggatgacaaggtcttattgagg
aagttatgcgaaaacttggatggaaaaggcgcagaaggttgggagtatggcggcaagtta
ttcctcgactgggcggacctcaccacggatacagctcgaatattgacatcagtcgtccag
gcaggatcacatcctgatccgagagaatccacaacgttatcagatcattcccggaaccta
cctagggtattacaactcctccccgccctgttcccagataaaaaagacatacaacaagtt
gcaggactaagtgagatgttaagtcctctatatcaattagcgggattgttgcattcggct
ggatacatcaacaaacaatctgtaccgacatatctggtagatgaagatagattggattta
cttcaatctgctgcatttgaatcgttcaacaaatccttagactctttacctgtttcagcg
taa
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