Kwoniella shivajii: 87956018
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Entry
87956018 CDS
T10982
Symbol
IL334_003887
Name
(RefSeq) uncharacterized protein
KO
K04523
ubiquilin
Organism
ksh Kwoniella shivajii
Pathway
ksh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
87956018 (IL334_003887)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ksh04131
]
87956018 (IL334_003887)
03051 Proteasome [BR:
ksh03051
]
87956018 (IL334_003887)
Membrane trafficking [BR:
ksh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
87956018 (IL334_003887)
Proteasome [BR:
ksh03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
87956018 (IL334_003887)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBQLN1
UBA
Dsc3_N
Rad60-SLD_2
Ubiquitin_4
TBK1_ULD
GerD
CUE
OTU1_UBXL
NT_N
RPN13_C
Crinkler
Motif
Other DBs
NCBI-GeneID:
87956018
NCBI-ProteinID:
XP_062791662
LinkDB
All DBs
Position
5:join(366650..366666,366782..366912,367002..367048,367108..367287,367427..367492,367565..367642,367714..367821,367903..368346,368451..368549)
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AA seq
389 aa
AA seq
DB search
MSEITITVKGPSELKLSITISPEKTVADLKESISAQSDVEKERQRLIYSGKVLKDEDAIS
TYKIQNGHTIHMVKGAAKSATPAASSSTPAASGAGTSSALPRLPQMGTGLNVGSNPIDNV
ENIHHGLAGFNPFAGQPGLDNMNDPNAMLGMMNNPEFLRSMTDMMSRPEVVDQIIAANPQ
LQSMGPQVREMMASPFFRQMMSNPDTLRMMMQMNSSMGGQGGAGAGGFNPFGAGGFGGAG
AGTGAGGATGGEANNDPFPNLFAPNANPTPSGNTAQPSSPTGNAPPNPLATLFGGAGARG
AGGAGGNPFGGFDPSMLFGGGAGGAGGFGGFGAPAAPRDDRPPEEIYATQLGQLNAMGLW
DAPKNIRALRSTGGNVEAAIEMLFSGQLD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaataacaataaccgtcaaaggtccttctgaactcaaattatcaataaccatc
tctcccgaaaagactgtagcggatttgaaagagtcaatatcagctcaatctgatgtagag
aaggaaaggcagagattgatctattcaggtaaagtgcttaaagacgaagacgcaatttca
acatataagatccagaatggccatactatccatatggtgaaaggtgctgccaaatcagct
actccagcagcttcatcttccacacctgctgcatctggagcaggtacatcatcggcttta
ccaagattaccacaaatgggcactggcttgaacgtcggtagcaatccaatcgataatgtc
gagaacattcaccacggattagctggatttaacccatttgcaggtcaacctggtttagat
aatatgaatgatcctaatgctatgttgggaatgatgaataacccagaattcttgagatca
atgacggatatgatgtccagacctgaagtggtagatcagatcatagctgctaatccacag
ttgcaatctatgggaccccaagtaagagaaatgatggcatcccctttcttcaggcaaatg
atgtcaaatcctgatactttaagaatgatgatgcaaatgaactcttcgatgggtggacaa
ggtggagccggtgctggaggattcaatccatttggtgctggtggttttggaggcgcaggc
gcaggtacaggtgcaggtggagcaacaggtggagaagcgaacaatgatccattccccaat
ctcttcgcaccaaatgccaaccctacaccatctggaaataccgctcagccatcaagtccg
actggaaacgcgccaccgaatcctttagcgacacttttcggtggagcaggagctagaggt
gcaggcggtgcaggtggaaatccgtttggaggctttgatccttccatgcttttcggagga
ggtgcgggtggtgctggcggtttcggtggattcggtgcccctgctgctcccagagacgac
agaccaccggaggagatttacgctacccagttaggacaattgaatgctatgggtctctgg
gacgccccaaagaacatcagagccttacgaagtacaggtggtaatgtagaagctgctata
gagatgctcttttccggtcaattagattaa
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