Kwoniella shivajii: 87956414
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Entry
87956414 CDS
T10982
Symbol
IL334_004283
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksh03021
]
87956414 (IL334_004283)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87956414 (IL334_004283)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
87956414 (IL334_004283)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
87956414 (IL334_004283)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_9
SH2
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
87956414
NCBI-ProteinID:
XP_062792053
LinkDB
All DBs
Position
5:complement(join(1467285..1467478,1467525..1467837,1467890..1468029,1468097..1469276,1469326..1469502,1469559..1470161,1470210..1470542,1470592..1470737,1470792..1470948,1470999..1471760,1471818..1471944,1471999..1472603))
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AA seq
1578 aa
AA seq
DB search
MSSRSASPEGEGDAIRPYGDERDSSEEESEDDPEEAKRIAEGFIVDEDEDEDDEEEDEEE
RERRRKERKKRKKREKIRAKREKQREDLELSEDELELLNENRGLAGTSQSRPLKRLRRRS
GSAATDEDRAGPTLQDMFRDDEDRRDRDEDDEDDLMDFIEEDEDDATGQGETEDQRRERK
REEKLKRRQKASKPELAGVDRASWDEIYAVFGDGQDYDWALDGEDGMDVDDDEDAVKKDL
RLEDVFDPAEIKARRLQDEDRAIANNDRPERHQLVNSTLSDNPVFAPDSLYPPPDIAASW
AFDKVSLRTQYLFCGLHEEGSYPEPTLDNPTPYPVYRRTELSIEFRNAVSSALNMMFVQH
LEVPYLWHYKRDAFSVLENQGQSSVQFLERDELWSLYTLGIRFRAIFDRNQQSQQLWSKI
KNRRPDIEDQYLTSTLFPSICMMSIEAAAEGSDWLSFHYANDLKVIKEDQAIEEGAKRLP
ERNEIDDLRSGPVMKLVEAFGISVSQVATTFNDLKGEPKPPKNAEKLPSELAEEYSGAGT
AFGSPEQALQAASLIITTELSKDPAIRQQTREFMDACGVISVTPTDRGMTIIDEYHLYYN
FKFLTRKPVQMFKDSPQFLHMLRAEEEGLITISIEADEMQVQSFVETLVRCCRSNDYGEI
STAWNELRAQICSDVTRKFLVPSAGKWLKEHLKSEAEEFVAERCRMELELRVNVQPFATP
GMEPGEIPSVLALTNGKGEMRDAIMAVMLDDDGNIRTQTKFDNLRDEQDKNTFVELIEKR
KPKVIVIGGMSVQAARLRDEAASALRELAVRSYGQNPPVSEAYGSHEQYQADLAEYDQKL
SQYLIPLIFVNDATARSFMNSEEAEREFPNLPLNGRYALGLARYTQNPLNAYAKLGKRIA
SVTFMEHHQKLINPEKLLLHLERGLVNSICFMGIEINTCVADAYQRAMLPFISGLGPRKA
DALVHGIHKAGGLTNRLAFSDLGLFGPTVFENVAGFLTIENDLKEIMLEAESPQTQPDPL
DMTRIHPEDYEFAQKMCQDALDLDVEDVTDRHKSEVVQTLMLDDKRGQKLGELNLDDFAF
NLQRQGEGNKRHTLGEIVNELIRYRADRRPPFYVPSEWEVVTMLTGETERTIGRGMKVTA
TVRKALSSRVFCQLESGMDAILERDYVADEDQPPVTSCEEFFKPRQAIKAVVIMPEPNRF
QVRISTRSSDLRQGVAFIQPFRDEPYNDLARKSAAEDAAAAKKRRQAGKVKRVVNHPNWH
IMNSGQAEQFLASQHRGDVVIRPSSKGLDHLAVTWKVDEDVYQHIDVQEIDKPNEYSLGR
ILRVAGRYSYSDLDELIINHVKAMARKLDELQLHEKYKPEDELEAYLKNYVQAHPGRSMY
GFSIDSDRPGYVRLCFLNKSTKDGGVISTWPVQVLPGAYKLNNAEVPGVTELCNAFKLQY
SARLAEQGSGGKTPGIRLGKTPLPGGRTPGGRTPAIGGRTPAIGGVRGGATPMYGVPGQG
MGRTPMQPGMTPNPYGAPIPQQAYGMPSNGYAPPQAGYGMPPSGPAGGYGRPPTGPQGGY
GGMTPGGNAGAGMNPERA
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcggtcggcctctcctgaaggtgaaggagatgcgattcgaccttatggtgat
gaacgagactcgtccgaagaagaatcggaagacgatccagaagaggccaagagaatagcg
gaggggttcattgtcgatgaagatgaggatgaagatgacgaagaagaggatgaagaggag
cgagaacgacgtaggaaagagcgcaagaagagaaagaagagggagaagattagagcaaag
agggagaaacaacgtgaagatttggagttatcagaggatgaactggaacttttgaacgag
aacagaggattagcagggacgagtcaatccagaccgttgaaaaggttaagaagacgtagt
gggtcagcagcaacggatgaagatagagcagggccaacgctgcaggatatgttcagggat
gatgaagatagaagagatagggatgaagacgatgaggatgatctgatggacttcatcgaa
gaagacgaggatgacgctaccggtcaaggtgaaactgaagatcaaagaagggagaggaag
agggaagagaaattgaagagaaggcaaaaggcgtcgaaacctgaattagcaggtgtagat
cgagcgtcatgggacgaaatctatgccgtgtttggtgatggacaagattatgactgggct
ttagacggagaagatggcatggatgtagacgacgatgaagacgcggtgaagaaagatctg
aggctggaagatgtcttcgaccccgctgaaatcaaagcccgacgtttacaagacgaagat
agagcaatagcgaacaatgatcgaccagaacgacatcaacttgtcaactccactctatcc
gataatccagtcttcgcaccggactcgttgtaccctccaccggatatagcagcgagctgg
gcgttcgacaaggtttctctaagaacgcaatatcttttctgtggactgcatgaagaggga
tcctaccctgagccaacactcgataaccctaccccttatcctgtctatcgaagaactgaa
ctttccatcgagtttagaaatgcggtctcatcggcactgaatatgatgttcgtgcaacat
ttagaggtaccatatttatggcactacaagagagatgcgttcagtgtgttggaaaatcaa
ggtcaaagttcggtccaattcctcgagcgagacgagctatggtcactatatacactgggt
attagattcagagcgatattcgatagaaaccaacaaagtcaacaattatggagtaaaatc
aagaatcgtcgtccggatatcgaagatcaatatttaacttcgacgttattcccttcgatt
tgtatgatgagcatagaagcagctgctgagggttcagattggttgtctttccattacgcc
aatgatttgaaagtgatcaaagaagatcaagctatagaagagggagcgaagagattgcct
gagaggaatgagattgatgatctgaggtccggtccggtaatgaaattggtagaggcattc
ggcatctcggtatcgcaagttgctacgactttcaatgaccttaagggtgaaccaaaaccc
ccaaagaacgctgagaaattgcctagtgaattggcggaggaatactcgggtgcgggaaca
gcatttggttcgccagaacaagctctacaggctgcaagccttataattaccactgaactt
tccaaagatccggcgatacgtcaacagactagagagtttatggatgcttgcggagtaatc
agtgtgacaccgacggacagaggaatgactatcattgatgaataccatctctactataac
ttcaaattcctcactcgtaaacccgtccaaatgttcaaagattccccccaattccttcat
atgctaagagcggaagaggaaggcttgattaccattagcattgaagcagatgaaatgcaa
gtgcagtcattcgtggaaacgctggtgagatgctgtcgatcaaacgattatggggaaata
tccactgcatggaacgagcttcgagcacagatctgttcggatgtcacacggaaatttctt
gttccttctgcgggcaagtggttgaaggagcatttgaaaagtgaagcagaggaattcgtt
gctgagcggtgtagaatggagctcgagttgcgagtcaatgttcaaccattcgctacacct
ggtatggaaccaggagaaataccctcagtcttggcactcaccaacggcaaaggcgagatg
agagatgcgatcatggctgtaatgttagatgacgatggaaatatccggacgcagacgaaa
ttcgacaaccttcgagatgagcaggataagaatacctttgttgaattgatagaaaagagg
aaacccaaagtcatcgttatcggaggaatgtccgtccaagcggcgagattacgcgacgaa
gctgcttctgcacttcgagaattggccgttcgatcttacggtcaaaatcctcctgtttcg
gaagcatatggaagtcacgagcaataccaagctgatctagcggaatacgatcaaaaactg
tctcagtatcttatccccctgatatttgtcaatgatgccacggcaaggtcattcatgaac
tcagaagaagccgaaagagaattccctaatttacctctgaatggacgatacgcattagga
ttggcaagatatacccaaaaccccctcaacgcgtatgctaagttaggtaaacgaatagcc
tcggtgacattcatggaacatcatcagaagttgataaatcctgagaagctcttactacac
ctggagcgaggtttggtcaattccatctgctttatgggaatcgaaatcaacacctgtgtc
gccgatgcgtatcaaagagcgatgctaccgttcatttccggtttaggacctaggaaagcg
gatgcattggtacacggaatacacaaagcaggcggtcttaccaatcggcttgcgttctcc
gacctcggcttgttcggacccactgtgttcgagaacgttgccggtttcctcactatcgaa
aatgatctcaaagaaatcatgttggaagcggagagtccccaaactcaacctgatccttta
gatatgaccaggatacatccagaagactacgagttcgctcagaaaatgtgtcaagacgct
cttgatcttgacgttgaggatgtcaccgatcgacacaagtcagaagtggttcaaaccctt
atgctggatgataaacgtgggcagaagttgggcgaattgaacttggacgactttgctttc
aatctgcaacgacaaggagagggaaataagagacatacccttggggagattgttaacgaa
cttatcagatatagagcagatcgaagaccaccattctacgttccttctgaatgggaagtc
gtcaccatgcttactggagaaacggagcgtacgataggacgaggaatgaaagtcactgcg
actgtgaggaaagcgctatcgtcaagagttttctgtcagttagaatcaggtatggatgcg
attctagagagagactacgtcgcggatgaagaccaaccccctgtgacatcatgcgaagag
ttcttcaaacctcggcaagctatcaaggcggtcgtgattatgcctgaaccaaatcgattc
caggttcggatatccactcgatcatcagacctacgacaaggcgtagcgtttatacaacct
ttccgcgacgaaccgtataatgatttagctagaaaatcagctgcggaagatgcagcagca
gctaagaaacgaagacaagcgggtaaggtcaagcgggtagtcaatcatccaaattggcat
atcatgaattctggacaagcagaacagtttttagcttctcaacatcgtggtgatgtcgtc
attcgaccctcgtcgaaaggtttagatcacttggctgttacctggaaagtcgatgaggat
gtttaccaacatatcgacgttcaagagattgataaaccaaacgaatactcgctaggcaga
atcttgagagtggcgggaaggtattcatattccgatttagatgaattgatcatcaatcat
gttaaagccatggcaaggaagttggatgagctgcaattgcacgagaaatacaagcccgag
gatgagcttgaggcatacctgaagaactatgttcaagcacatcctggaaggagtatgtat
ggattctcaatcgattcagaccgaccaggttacgtcagactttgtttcctgaataaatct
acaaaggacggtggtgtgatatccacttggcccgttcaagtcctacccggagcgtataag
ctaaacaacgctgaagtacctggagtgactgaactatgcaacgcattcaaacttcagtac
tcagctagacttgcggagcaaggtagtggaggtaaaacacctggtatcagacttggtaaa
actcctttacccggtggaagaacacctgggggaagaactccggctattggaggtaggacg
ccagctataggtggtgtaaggggaggggcaacaccgatgtatggcgtgccaggtcaagga
atgggtagaacccctatgcaacctggcatgactcccaatccatatggcgcaccgatacct
cagcaagcgtatggaatgccatctaacgggtatgcaccccctcaagctggctacggaatg
ccaccaagtggtccagccggagggtatggtcgtcctcctacaggacctcaaggtggttat
ggtggtatgactcctggaggtaacgcaggggcggggatgaaccccgagagagcgtga
DBGET
integrated database retrieval system
