KEGG   Kwoniella shivajii: 87956443
Entry
87956443          CDS       T10982                                 
Symbol
IL334_004312
Name
(RefSeq) uncharacterized protein
  KO
K11374  elongator complex protein 2
Organism
ksh  Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ksh03016]
    87956443 (IL334_004312)
Transfer RNA biogenesis [BR:ksh03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    87956443 (IL334_004312)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_RSE1_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_IP5PC_F NTF2_7 MIOS_WD40
Other DBs
NCBI-GeneID: 87956443
NCBI-ProteinID: XP_062792082
LinkDB
Position
5:complement(join(1544212..1544326,1544382..1544596,1544679..1545187,1545280..1545584,1545675..1546082,1546143..1546506,1546594..1547077))
AA seq 799 aa
MRVNPAYISIGTNRSSSCSACTSNGLLAFGAGKLVALWDTESSQGVCETLPGHKGQITTL
KLLGNDQFISGDTVGEIRVWGQKDDKWICEQKWSAHEGSSISAIGTGKDLVLTGGSDGSI
KVWKWNKGKGEVGMSLEEIQKIQIKGKLPLDIELTYLPGSNSPILAVGATDRLIRIYTLS
PAGNFVHSLSLEGHEDWVRCLSFTSYPSSSDATKEDLLLASGSHDNFVRLWRVSQIEAQE
PREEKSSEEGLDLLDEFERRLNGEGSGQISTKAHVMAVQDGDQSLRYNITLEALLIGHES
SLTNIHWSPPSTTSSPLLLSTAADNSLIMWVPSSLSTSTDGIWVPEHRFGAIGGRGLAFY
GAIWGKDGESVMAGGWNGGWERWVKSDEGWEVRSGVNGHYGDVQSIAWDPRGEYLISVGS
DQTSRIHAESSIPSSSTSRWAEIARPQIHGYDMTDIAFISPLRFVSGADEKVARVFDAPE
GFVESLRTLGVSEGSRNEEGSRPKGATVPPLGLSNRALQKAPAAEEAIEKHGQNEAIISI
SHTLTSLPTEEELATSTLWPEIEKIYGHGYELVCVASSQSGDLIATASKATNAEYAGIRV
ISTKNWEIFGDVLNGHSLTVTRIVFSQDDQFILTCSRDRGWRIFETSDKGYTLLAKDEKA
HSRMVLDATWAKTEENGKSCLFATASRDKTVKIWIPSEEDRSQWIAADTIKFTEATTAVD
IISYQDSYLLAVGTETGSISIHSLKQVEDKVESKELISLESSISHVAPVNRLAWRWKGDR
VQLASCSDDRSVRVFDVEV
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgcgggtcaatccagcttatatatcaatcgggacgaatcgatcttcatcttgttcagct
tgcacatcgaatggtttactcgcttttggagcaggcaaattagtcgctttatgggacact
gaatcatctcaaggagtatgcgaaactctcccggggcataaaggtcagatcaccactttg
aaactattgggaaacgatcaatttatatcaggagatactgttggggagatcagggtatgg
ggtcaaaaggacgataaatggatatgtgaacaaaagtggagtgcccatgaagggtcttcg
atatctgctataggtacaggaaaagacctagtccttacagggggttcagatggttcgata
aaagtctggaaatggaataaaggtaaaggggaagtggggatgagtttagaggagattcag
aaaattcagattaaagggaaattacctttggatatagaattgacttatttacctggatcg
aattccccaatactagctgtaggagcaactgatcgacttatccgaatatacaccttatca
cctgctggaaacttcgtccattctttatctctggaaggacatgaagattgggttaggtgt
ctttccttcacttcttatccttcctcttctgatgcgacgaaagaagatctattattagct
tctggatctcacgataatttcgtacgtttgtggagagtatcccaaatagaggcacaagag
ccacgggaagaaaagtcatcagaggaagggttggatctactcgatgaatttgaaagaagg
ttgaatggtgaaggcagtggtcagatttcaaccaaggctcatgtgatggcagtacaagat
ggcgatcaatcattacggtacaacataaccctcgaagctctactcataggtcacgaatcc
agtttgaccaatattcattggtcacctccctcaacgacttcgtcacctttactactgtcc
actgctgccgacaactcgttgatcatgtgggttccatcatcactctccacctctacagat
gggatatgggtacctgagcatcggtttggagcaattggtggaagaggattggcgttttac
ggtgcgatctggggtaaagacggtgaaagtgttatggccggaggatggaatggtggatgg
gaaagatgggtcaaaagtgatgaaggatgggaagtcagaagtggtgtgaacggtcattat
ggtgatgtacaaagtatagcctgggatccaagaggagaatatttgatttccgttgggtcc
gatcagacatctcgtatacacgccgaatcatctatcccatcttcatccacttctcgttgg
gcagaaattgccagacctcagatacacggatatgatatgactgatatagccttcatctct
cctttgagattcgtcagtggtgcagatgagaaagtagctagagttttcgacgctcctgaa
ggattcgtagaatcactgaggacattgggagtcagcgaaggtagtagaaacgaagaaggg
tcaagaccaaaaggagctactgtacctccattaggattgtcaaacagggctctacagaaa
gctcctgcagcagaagaggcaattgagaaacacggtcaaaatgaagctataatttccatc
tcacatacacttacatcgctccccacagaagaagaattagcaacatcaactctatggcct
gaaattgagaagatatatggacatggatatgaacttgtttgtgtagcatcttcacagtct
ggtgacctgatagctacagcatcaaaagcgacgaatgccgaatatgctggtataagagtt
atatccactaagaattgggaaatattcggtgatgtcttaaatggtcattctttaactgtc
accaggatagtgtttagtcaggatgatcaattcatcttaacatgctcaagagatagagga
tggagaatattcgaaacatcagataaaggttatacattattagcgaaagacgagaaagct
cattctagaatggtgttagatgccacttgggctaaaacggaagaaaatggaaaatcatgt
ttgtttgctactgcctcaagggacaaaaccgtaaaaatctggataccttccgaagaagat
cgatctcaatggatagcagcagatactatcaagtttaccgaagctactactgctgtagat
atcatttcgtatcaagatagttatctattagcagtcggtactgagaccggctcgatctca
atccattctctcaagcaagttgaggataaggtagagtcaaaggagctgatcagcttagaa
tcaagtatatcacacgttgcaccggtcaaccgactcgcctggagatggaaaggtgatcgt
gtgcagttggccagctgtagtgatgatcgaagcgtcagagtgtttgatgttgaggtgtag

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