Kwoniella shivajii: 87956545
Help
Entry
87956545 CDS
T10982
Symbol
IL334_004414
Name
(RefSeq) uncharacterized protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ksh Kwoniella shivajii
Pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87956545 (IL334_004414)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87956545 (IL334_004414)
Spliceosome [BR:
ksh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
87956545 (IL334_004414)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Alveol-reg_P311
Motif
Other DBs
NCBI-GeneID:
87956545
NCBI-ProteinID:
XP_062792183
LinkDB
All DBs
Position
5:complement(join(1806319..1806557,1806658..1806833,1806906..1807038,1807121..1807862,1807984..1808397))
Genome browser
AA seq
567 aa
AA seq
DB search
MSLADSLLADLDGFSDDEGRGPSPSPEREQPTAGPSTSKGFGLGSMLPPPLPSKAKRTAS
EMDVDDGDANNGEDDEEEDDGLTLENGASAVGFVPEGGVRPAEELDADEVEQTDMKDVED
VAKVAKLMTGKKLKEVLADIAKYTASPTDMSESNSLEENPEYHLVVTANNMSVEVDNENL
LVHKFIRDHYAPRFPELEQLITDPWTYIAAVQAIGNADDLTKCTFPSTLPAATILSITLT
ATSTRGRKLSNGEWITVQNAIIVAGELRSAREKIFAYVESRMAAVSPNLSAIVGTGIAAK
LLGLAGGLHAFSRQPSCNIMLFGAMKKSLANTHLSAASQQRHTGFIFQSAIVQSAQPEDR
RRAQRAVSAKCTLAARIDAGKGSRDGSYGRKCFTDLQKRIEKMAEPPPNKMTKALPVPQE
TNRKKRGGKRARKQKEAYAQTELRKLQNRMEFGKAEEEVGIDDETVGLGMIGSGSGKVRG
EVADARSKAKLSRANKLRTQLLGRSAVSNDAKSGLSTSLSFTPVQGIEIVTPSLSAAQKV
AAANERWFAGGTFTHVKKGGSNIPGQN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggccgactcattgttggccgacctggacggcttctcagacgatgagggccga
ggtccatccccttctcccgagagggaacaacctacagccggaccatcaacatcaaaaggg
tttggattaggctcaatgctccctcctcccttaccttccaaagcgaagcgaacagcttcc
gaaatggatgtggacgatggcgatgcaaataacggtgaagacgatgaagaagaagatgat
ggtctaacgttggaaaatggtgctagtgcagtaggctttgtacctgaaggaggagtcaga
ccggcagaagaattagatgcggatgaagttgaacaaactgatatgaaagatgtcgaggat
gtagcaaaagtagcgaaacttatgaccgggaagaaattgaaagaagtcttagcggatatt
gccaaatacacagcctctcctacagatatgtcggaaagtaactccctcgaagaaaatcct
gaataccatctagtcgtcacagcgaataacatgtcagtcgaagtggacaacgaaaaccta
ctagtgcacaaattcatcagagatcattacgctccaagatttccagaattagaacaactt
ataactgatccttggacatacatcgccgcagtacaagcaattggaaatgctgatgatttg
acaaaatgtacattcccttcaacacttccagccgctacgatactttcgataacgttaaca
gcaacttccactagaggaagaaaattatcaaatggagagtggataacagttcaaaacgct
ataatagtagcaggagaattgagatctgcgagagaaaagattttcgcttatgtcgaatct
agaatggctgctgtctcacctaatctatctgctatagtaggaacaggtatagcagctaaa
ttattaggcttagcaggtggtttacatgctttttcaagacaaccaagttgtaatataatg
ttatttggtgccatgaagaaatctttagcaaatactcatttatcagctgctagtcaacaa
cgtcatactggtttcatatttcaatcggctatagttcaatctgctcaacctgaagataga
agaagagctcaaagagctgtatctgcgaaatgcactcttgcagctagaatcgacgccggt
aaaggttcaagagatggttcatatggtagaaaatgctttacggatttacaaaaacggatt
gagaaaatggctgaaccaccacccaacaaaatgacaaaagcgttgcctgttccccaagag
acaaacaggaaaaagagaggcggtaaaagagcacgaaaacaaaaagaagcgtatgctcag
actgaacttcgtaaactccaaaaccgtatggaattcggtaaagccgaagaagaagttggt
atcgatgatgagactgttggtcttggtatgatcggttctggttctggtaaagtcagaggt
gaagtcgcagatgctagaagtaaagccaaattatctcgagcgaataaacttcgtacccaa
ttgctcggtagatcagcagtatcgaatgacgccaagtccggtctatcaacttcactctct
ttcactccagtacaaggtatcgagatcgtcactccgtcgttatctgccgcgcagaaagtg
gctgctgcgaatgagagatggttcgccggcggtactttcacccatgtcaagaaaggtggg
agcaatatccctgggcagaactaa
DBGET
integrated database retrieval system
