Kwoniella shivajii: 87956801
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Entry
87956801 CDS
T10982
Symbol
IL334_004670
Name
(RefSeq) uncharacterized protein
KO
K07466
replication factor A1
Organism
ksh Kwoniella shivajii
Pathway
ksh03030
DNA replication
ksh03420
Nucleotide excision repair
ksh03430
Mismatch repair
ksh03440
Homologous recombination
ksh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87956801 (IL334_004670)
03420 Nucleotide excision repair
87956801 (IL334_004670)
03430 Mismatch repair
87956801 (IL334_004670)
03440 Homologous recombination
87956801 (IL334_004670)
03460 Fanconi anemia pathway
87956801 (IL334_004670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksh03000
]
87956801 (IL334_004670)
03032 DNA replication proteins [BR:
ksh03032
]
87956801 (IL334_004670)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87956801 (IL334_004670)
Transcription factors [BR:
ksh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
87956801 (IL334_004670)
DNA replication proteins [BR:
ksh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
87956801 (IL334_004670)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
87956801 (IL334_004670)
MMR (mismatch excision repair)
87956801 (IL334_004670)
DSBR (double strand breaks repair)
HR (homologous recombination)
87956801 (IL334_004670)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
HROB
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
87956801
NCBI-ProteinID:
XP_062792438
LinkDB
All DBs
Position
6:complement(join(489045..489146,489236..489325,489385..489499,489659..489973,490053..490273,490329..490396,490465..490549,490602..490706,490766..490834,490890..490992,491053..491319,491388..491528,491603..491742))
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AA seq
606 aa
AA seq
DB search
MASPLTAGFCELVFNSAEAPEGVQPTLQVLSVKKINAPGASGQDRYRLILSDGKHFIQAM
IATQLNHMVESKELDKNVLIKMTGYVTNAVQGRKLVIILQLETVPWNGEKIGNPTNLEQQ
QGAGGTSAPAAAAAAPKQEVGGFAARQQSSAGRGGAASKPGARGKQEVGPLYPIEGLSPY
QNKWTIKARVTQKSDIKHYSNQRGEGKLFSVTFMDETGEIRATGFNEAVDNFYNMLEEGK
VFFISRARINIAKKQFSNVNNEYEIMFENQTEIEPCDDDTVPQVKYNFKGIGDLGELQKD
EICDVIGVVREVHELGSVTSKATNKPFAKRDIQLVDSSGQSVRLTLWGKQAETFQADDQP
VIAFKGVKVGDFGGRSLSMFSSATMSVNPDISEAHQLRGWFDAEGHNTQFQAYTNQGNAN
STSGAAQGAKPSELKTIGEAKDESLGMSEKTDYFTTSATVAFVKQETFSYPACANPEGCN
KKVVDDGTGWLCEKCDRKWDNPIHRYILSMNVMDHTGSFWITAFNEQAEQIMEISANDLM
KLKEEGSDINAPFQKATGKTYAFQMMAKQDSFNDQPKVRYQCRRVSAPDYVSESAHLSQL
INQMNV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccactcacagctggtttctgcgaattggtgttcaactccgcagaagcgcca
gaaggtgttcaacctactcttcaagtattaagtgtgaagaagatcaacgctcctggagct
tctggacaagacagatatagactcatattgtccgatggaaaacactttattcaagctatg
attgccactcagctcaatcatatggtagagtcgaaagaactagacaagaatgttctgatc
aaaatgactggatatgtcacaaatgctgttcaaggaagaaaactggttatcatacttcaa
ttagaaacagttccatggaacggagaaaagatcggtaatcccactaatctcgaacaacag
caaggggcaggagggacctcagcaccggctgcagctgcagctgcaccaaaacaggaagta
ggaggattcgccgctagacaacagtcaagcgctggtagaggtggtgctgcttctaaacct
ggcgcaagaggaaagcaagaagttggtcctctttatcctatagagggattgagtccttat
caaaataaatggactatcaaagctcgtgttactcagaagtcagatattaaacattactcc
aatcaacgaggagaaggaaaattgttcagtgttacatttatggatgagactggagaaatc
agagcaacaggtttcaatgaagctgtggacaatttctacaacatgctcgaggaaggaaag
gtgtttttcatctctcgagcacgtatcaatattgcgaaaaagcagtttagtaacgtaaat
aatgagtatgaaatcatgtttgagaatcagactgagatcgaaccttgtgacgacgatact
gtgcctcaagtgaaatacaacttcaaaggaatcggtgacctaggggagttgcagaaagac
gagatctgtgatgttattggtgtagtaagagaagttcatgaacttggatcagtgacgtca
aaggctaccaacaaaccttttgccaaacgagatatccagcttgttgactcttcgggtcaa
agtgttagattgacgttatggggtaaacaagccgaaaccttccaagcggatgatcaacct
gtcattgctttcaagggcgtcaaagtcggtgatttcggtggcagatcgctatcaatgttc
agctctgctacgatgtcggtcaatcctgatatttctgaagctcatcaattaaggggatgg
tttgatgccgaaggacataatactcaattccaagcatataccaatcaaggcaatgccaac
tctacatctggagcagcacaaggagccaaaccttcagaattaaaaacaatcggagaagct
aaagatgaatcgttgggaatgtctgagaaaacagattatttcactacttcggcaacagta
gctttcgtcaagcaagagactttcagttatccagcttgtgccaatcctgaaggctgtaat
aaaaaggtggtagatgatggtactggttggttatgtgagaaatgtgataggaaatgggat
aacccaattcatcgatacattctttcgatgaacgtgatggaccacacgggatcgttctgg
atcaccgcattcaatgaacaagctgaacagatcatggagatcagtgcaaacgatttgatg
aaattgaaagaggaaggaagtgatatcaacgcacctttccaaaaagctactggtaaaaca
tatgctttccagatgatggctaagcaagattccttcaacgatcaaccaaaagtacgatac
cagtgtagaagggtctctgcacctgattatgtatccgagagtgctcatttgagtcaattg
atcaatcaaatgaatgtatag
DBGET
integrated database retrieval system
