Kwoniella shivajii: 87956884
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Entry
87956884 CDS
T10982
Symbol
IL334_004753
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87956884 (IL334_004753)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87956884 (IL334_004753)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87956884 (IL334_004753)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
Dynamitin
DUF4455
PMD1-like
Tuftelin_like
CEP162_helical_1
RBSN_mid
ACF4_like
Mis12
DUF724
Motif
Other DBs
NCBI-GeneID:
87956884
NCBI-ProteinID:
XP_062792519
UniProt:
A0ABZ1D181
LinkDB
All DBs
Position
6:join(722697..722700,722749..722781,722834..722872,722940..724660,724726..724925,725006..725360)
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AA seq
783 aa
AA seq
DB search
MSGFSGFGQNNNSGSSTGAFSFGAKPAGTNPPAGGSLFGQQPAQPAQPSTSLFGGGASSN
TPASQPASGAFSFGGTSATNQPSSGGLFGGGSNTAPAPAAGGSMFGGGGAAAAAPAGGSL
FGAKPAGSNTPGTSTPTPFSFGSGTPAASAVAPAPTAPSGGSLFGGFGQNNNNNTTASTG
STTPASKPPFGGFGSTTPAAAPPSTANTGGGLFGSKPPAPAGGSLFGGSGTSTPTTTAAP
ASGGLFGAKTVESSTPGTPAGSLFGAKPAETTTTPAAAPPTGGFSFGNKPAAPTSAAAPS
TSLFGSAPTASSADANKPAAPASGGMFGGGSGTSLFGAKPTEPAKTDTPTPAAPSSSLFG
GAGTTKPAEAPKPSGGFSFGNLGGKTASPAPTPSSSTPAAPEAPKTGGFSFGNLGGGAAA
TDKPKEATSAEAPKSGGFSFGGGAAAPAATAPTGDQNKASEVPKPAGGFNFGNLGGSSKP
AETSAPAAGSSLFGGATKPAETAATTSAPASGGLFGAKPTAPATAPTAASTSTPAGANQN
TAPAAGPSSEPAPNLLRGKTLEDIVDGWTKDLDSQVKEFEKQAGEVREWDKVLVRNGNQI
TALHRQVLEAQQNQAAVDKALDYIETQQKQLESMMGVYEKEISKLSNDNTRPLAAKMPAD
REREKSYTLAEDLNKQLDDLSRNLGQMIEEVNKLSTSSNSHATLDSSINGIPATPSASIA
DAASQIPDDPINQLSAILGAHLRALNSIDSNAGRLEGKVGELEGRMGSGNSINDRRGWGL
PRR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctggattttcaggattcggccaaaacaataacagcggtagctcgacaggcgctttc
agctttggtgccaagcctgccggtaccaaccctcccgcaggcggatccctcttcggtcaa
cagccagctcaaccagctcaaccatcaacatcattatttggtggtggagcgtcatctaat
acacctgcatctcaacccgcatcaggagcattttcgtttggcggtacatccgctactaat
caaccttcaagtggaggattgttcggaggaggatcaaatactgctcctgcacctgcagca
ggaggaagtatgtttggtggcggaggagcagcggcagcagctcctgcaggtggatcatta
ttcggtgctaaaccagctggatcaaatactcctggaacatcgactcctacacctttctca
tttggaagtggaactcccgcggcatctgcagttgcacctgcgcccactgctccctcaggt
ggaagtctttttggtggatttggtcagaataacaacaacaacactactgcaagtacagga
tccactacgcctgcttccaaacctccttttggtggattcggatcaactacaccagccgct
gcaccaccttctacagctaatacaggcggagggttattcggttctaaacccccagctcct
gctggaggaagtttatttggtggatcaggaacttcgacacctactaccactgctgcccct
gccagcggtggtctattcggtgctaaaactgtagaaagtagtactcccggtacacctgct
ggaagtttatttggtgctaagccagctgaaactacaaccaccccagctgcagctcctcca
acgggagggttctcatttggcaataagcctgctgcacctacttccgctgctgctccatca
acatccctctttgggtccgcccctactgcgtcatcagcagatgccaacaagcctgctgcc
cctgcctccgggggcatgtttggtggtggatcagggaccagcttgttcggtgcgaaaccg
accgagccagcaaagaccgatacacctacacctgctgctccttcttcaagtttattcgga
ggtgccggtacaactaaacccgctgaagctcctaaaccctctggtggattctccttcggt
aatctaggtggaaagactgcatcacccgctccgacaccatcttcttccactccagctgct
cctgaagctcccaagactggcggtttctcattcggtaatctgggcggaggtgcagctgct
acagataaacccaaagaagctactagcgcagaagcacctaaatctggaggattcagcttc
ggcggaggtgcagctgcacccgctgcaacagctcccaccggcgaccaaaataaagcttct
gaagtacctaaacctgctggcggattcaatttcggtaacctcggagggtcttcgaaaccc
gcagaaacaagtgcgccagctgctggttcaagtctctttggcggtgccaccaaacctgct
gaaacggctgcaacgacctctgctcccgcctctggaggcttatttggtgcaaaacccaca
gctcctgctactgctccgactgctgcttcaacttccacgcctgctggagcaaaccaaaat
acagcacctgcagctggaccgtcgagcgaacctgctcctaaccttttacggggaaaaaca
ttggaggatatcgttgatggatggaccaaagatcttgattctcaagtcaaagaattcgag
aaacaagctggtgaagttcgggaatgggataaggtcttagtgagaaatggtaatcagatc
accgctctgcatagacaggtgttggaagcccagcaaaaccaagctgcagtagataaggct
ttggattatattgaaactcaacaaaagcaacttgagagtatgatgggagtgtatgaaaaa
gaaatttctaaattatcgaatgacaacactagacctttggcggcgaagatgcctgctgat
agggaaagagagaaatcatacactttagctgaagatttgaataaacaactggatgattta
tcaagaaatctgggacaaatgatcgaagaagtaaacaaattgtcaacttcatcaaattca
catgccacgttagactcatctataaatggaataccagctacaccatcagcttcaatcgca
gatgctgcatctcaaatacctgacgatccaatcaatcaattatcagccatcttaggtgct
catctgagagcgctgaatagcattgatagtaatgcaggtcgattagaaggtaaagtaggt
gaattagaaggtaggatgggaagtggaaattctataaacgatagaagaggttggggatta
cctagacgatga
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