KEGG   Kwoniella shivajii: 87956889
Entry
87956889          CDS       T10982                                 
Symbol
IL334_004758
Name
(RefSeq) uncharacterized protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
ksh  Kwoniella shivajii
Pathway
ksh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    87956889 (IL334_004758)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ksh03009]
    87956889 (IL334_004758)
Ribosome biogenesis [BR:ksh03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    87956889 (IL334_004758)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_CAF1B_HIR1 Utp12 PQQ Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_BBS7 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR35_2nd Beta-prop_IFT140_2nd RPAP3_C
Other DBs
NCBI-GeneID: 87956889
NCBI-ProteinID: XP_062792524
LinkDB
Position
6:join(731588..731849,731927..732027,732098..732218,732301..732430,732481..732680,732742..732920,732978..733164,733235..733446,733518..733808,733873..734064,734135..734322,734374..734480,734540..734682,734748..734961,735076..735392)
AA seq 947 aa
MPHQHKRQKNGTVLATNADQPAAGPSKPSPRLFAPFRALGHVTDHVPYAMFVHTPQGALA
TPTVNITTSVGRSWLMWDAARMTLVFAGPDAGAQINALTMTGTEIFASAGTRVIKYHRGK
ETGSYLSPDESNLGKMLIFGDELLILKEDGTGMFIYDLPTRQLKNQLTFHSSFTATHLMH
PSTYLNKVLIGSQQGELQLWNVRTCSLIHTFAHPTPASSSPITAIVQSPAIDVIGVGYLD
GRVRVLDIRQGDLVMQMKIEDGAVAALTFRMDGPPILATASSTGSLVTWDLSKGGRVLHV
VRGAHDQSVTGLQWVAGQPLLISSSADNSVKQWLCDSPTGMPRLLKFRGGHHAPPTCIRY
YGEDGKQILTAGRDRSLRYTSVVRDSRSFELSQGSLIKKAIGLGVTVDHLKYPQITAISS
SSIRSKDWEDVVTAHADDAIARTWRVQEKRLGPWTFEMENGVAQAVSVTACGNFSLVGSS
TGEIRMYNMQSGKERRSFSLSGPAPGTSKPSIIAQSKTAKAKAAQLKATEGMKKSLEAIT
GLVSDALNRVVVASTLEGKLYFFDFHTTQLTHAVQLSTSITSMSLNRDSGLISLTCDDLV
VRLLDIETRRIVRELRGFKGRILDTVFSPDSRWLIATSLDSTIRTFDIPTGRLVDAFKTT
SIATSLTFSPTGDFLATAHVDSVGIHLWANKAQFSDIALRHIPEEEDVPEVDLPSVQGLE
EDAAIEGVEPIGAPEFTNIYTTPEQLTEGLLTLSLMPRSRWQTLLNLETIKQRNKPKEPP
KAPEAAPFFLPTVSGLETRFDFSATQDKNEDEGKNGQRLELSSGWLESEFTKRLSKEDED
GDYNSFFEYLKSLPPSTLDMEIRSLISLDHLASFLNALIGRLQSHKDFEAVQAIMSVFLS
VHGDILISNEELKSKLEELRQEQKRESSRLRELVGYALGTLGFLRGT
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgcctcaccaacataaacgacagaaaaatggcacggtacttgctaccaatgctgaccag
ccagcagcaggaccatctaaaccatcgcctcgacttttcgccccttttcgagcgttgggt
catgtaacagatcatgtaccgtatgcgatgtttgttcataccccacaaggagcactagct
actccaacagtcaatatcacgacttctgtggggcgaagttggttaatgtgggatgctgct
aggatgactctggtttttgctggacccgatgccggtgcacaaattaacgctctcacaatg
accgggacagaaattttcgctagtgctggtacaagggtaatcaaatatcatcgagggaag
gagactggatcttatctatctcctgatgaatccaatttaggcaagatgttgatcttcggt
gatgaattattgatattgaaggaagatggaactgggatgttcatctatgatcttcctact
agacaattgaaaaatcagctcactttccactcatcattcactgcgacccatctcatgcat
ccctctacatatttgaacaaagttttgatagggagtcaacaaggagaattacaattatgg
aacgtcagaacttgttctttaattcacacattcgctcatccgacacccgcatcatcctcc
ccaataacggctattgtccaatctcctgcaatcgacgttatcggtgtgggatatttagac
ggtagagtcagagtcctggatatccgtcaaggtgatttggtgatgcagatgaaaattgag
gatggtgcagtggctgctttaactttccgaatggacggaccacctattcttgctactgct
tcttcaaccggatcactggtcacttgggatcttagtaaaggtggacgagtcctgcatgtc
gtacggggggcacatgatcaaagtgtaacgggtctacaatgggtggccggtcaaccgttg
ttgatttcatcaagtgctgataacagtgtcaaacaatggctttgcgactctcctactggc
atgcctcgactactcaaattccgtggaggccatcacgctcctcccacatgtatcagatac
tacggtgaagacggcaagcaaatcttgacagctgggagagatcgatctttgcggtataca
agtgttgtaagagattcaaggagtttcgagttatcccaaggttctttgattaagaaagct
atcggtttgggagtcactgtcgatcatctgaaataccctcaaataactgctatctctagt
tcttccattagatcgaaagattgggaggacgtagttacagcccatgcggatgacgcgatt
gcaaggacatggagggttcaagagaaaagattgggtccttggacgtttgagatggaaaac
ggtgttgcgcaggctgtaagcgtgactgcttgtggtaatttctcgcttgtcggatcatca
acgggtgaaataaggatgtacaacatgcaatcaggaaaagagagacgatctttctcactc
tcaggtcctgcacctggcactagtaaacccagtattatcgcccagagtaagactgcaaaa
gccaaagctgcccagttgaaggctacagaaggtatgaagaagagtctagaagctatcaca
ggtttagtcagtgatgctttgaaccgagtagtagtcgccagtacgctagaaggaaaatta
tactttttcgatttccacactactcaactcactcacgctgtccaactgtccacctctata
acttccatgtccctcaaccgagattctggtttaatttccttgacatgtgacgacctcgtt
gtgagactgcttgacatagagactagacgtattgtcagagagttgaggggtttcaagggt
cgaatcttggacacagttttctctcctgactccagatggctcattgctacatcgctcgat
tccacaatcagaactttcgatatccccaccggccgtctggtggatgccttcaaaactacg
tcaatcgcgaccagtctcacattctctcctactggggacttcttggctacagcacacgtg
gatagtgtcggtatacatctctgggcaaataaggctcagttctctgacatagctttgcga
catattccagaagaggaggatgttccagaagtcgacctaccttccgttcaaggactggag
gaagatgcagctattgagggtgttgaacctatcggagctcctgaatttaccaatatctac
accacacctgaacaacttaccgaagggttattgaccttgtcattaatgccgagatcaaga
tggcagactttgttgaaccttgagactatcaagcaacgtaataaacccaaagaaccacct
aaagctcccgaagcggctccatttttcttgcccacagtatcaggtcttgaaactcgattt
gacttttcagcgactcaggataagaatgaagacgaaggtaagaatggacaaagattggaa
ttgtcaagtggatggttggaaagcgaatttacaaagaggttaagtaaggaagatgaagac
ggtgactataattcattcttcgaatacctgaaatcacttccaccttcaacactagatatg
gaaattcgatctctgatttccctcgaccatttagcatcattcctgaatgctttaataggt
agattgcaatcacataaagatttcgaagctgttcaggctataatgtctgttttcttgagt
gttcatggagatatcctcatatcaaatgaagaactgaagtcaaagctggaggaattgaga
caagaacaaaagagggagagctcaagactgagggaattagtaggatacgctttaggtact
ttaggcttcttaagagggacgtag

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