Kwoniella shivajii: 87956909
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Entry
87956909 CDS
T10982
Symbol
IL334_004778
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ksh Kwoniella shivajii
Pathway
ksh03010
Ribosome
ksh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
87956909 (IL334_004778)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
87956909 (IL334_004778)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ksh03011
]
87956909 (IL334_004778)
04121 Ubiquitin system [BR:
ksh04121
]
87956909 (IL334_004778)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksh04147
]
87956909 (IL334_004778)
Ribosome [BR:
ksh03011
]
Ribosomal proteins
Eukaryotes
Small subunit
87956909 (IL334_004778)
Archaea
87956909 (IL334_004778)
Ubiquitin system [BR:
ksh04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
87956909 (IL334_004778)
Exosome [BR:
ksh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
87956909 (IL334_004778)
Exosomal proteins of colorectal cancer cells
87956909 (IL334_004778)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
IBR
DUF2604
TBK1_ULD
Ubiquitin_5
UBL_UBAC1
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
87956909
NCBI-ProteinID:
XP_062792544
LinkDB
All DBs
Position
6:complement(join(803435..803553,803617..803722,803799..804033,804103..804122))
Genome browser
AA seq
159 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKRKKVKMAILKYYKVGSDGKIQRLRRE
CPAPTCGAGVFMAWHKDRQSCGKCGLTYTFEPGTKPTAA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaaaacccttacgggtaaaaccatcaccctcgaggtcgaatcctct
gacactattgacaatgtcaagtctaaaattcaagacaaagaaggtatcccacctgatcaa
caacgattgatcttcgccggtaaacaacttgaggatggtcgaactctctccgactacaac
atccaaaaggagtctaccctccatctcgttttgagattgagaggtggtgccaaaaagagg
aagaagaagaactacaccacccccaagaagatcaagcacaagagaaagaaggtcaagatg
gccattctcaagtactacaaggtcggatctgacggtaaaatccaaagacttagacgagaa
tgtcccgctcctacttgtggtgccggtgtcttcatggcttggcacaaggacagacaatct
tgtggaaagtgtggtcttacttacaccttcgagccaggaaccaaacccaccgctgcttaa
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integrated database retrieval system
