Kwoniella shivajii: 87957307
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Entry
87957307 CDS
T10982
Symbol
IL334_005176
Name
(RefSeq) uncharacterized protein
KO
K11360
transcriptional activator SPT8
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksh03021
]
87957307 (IL334_005176)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87957307 (IL334_005176)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
87957307 (IL334_005176)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
87957307 (IL334_005176)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
87957307
NCBI-ProteinID:
XP_062792941
LinkDB
All DBs
Position
7:complement(join(130388..130488,130553..130686,130752..130936,131020..131865,131931..132077,132141..132595,132649..132890,132963..133024,133083..133142))
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AA seq
743 aa
AA seq
DB search
MRSDDEDDEDEYYDENEEEDDEGLNGVNGDEDDGDGDDAMEDGSDDDASDADEDGDEGEE
DDEDEDEEGDDDNDDDEEEGEDNEEEEEDEQDQEASTEDEGEGEAEGEDGDIVMDGIDEE
PGSIKRSRSRSLQEITPNNLPPPPHILRRNLFIPSYTSSPKSLSIEAIVGIPLPSPVHSL
TSTSCLSYLLAGSQDGYVRVYDFWSSVNGGQMMTAQQRSVVGLGETVNKAGVGRGWWANE
VDGITGGSVGKRAEPVYSMACESDGLFALTGTQSGPINLFTLRHAPGHHVHSLKGHTNVV
SCMSLLPSEKGLLSGSWDGTVREWDLNTGQTVRSYPTHGAQLSSLSFRPFTHPASPTPSP
RRQSEIDEDGEEIDGDITTKENISISMGLDFFSKEETQDENATQNGLPINDNNEPTESHT
EIDAVKEEAILNGDVEMAETKSEAKSPSMDSLFGGDDDVDADAEGETVPPSIVPSKAPTP
LREGSPTVNSSRLKGLGLALPGQPKPHASPTTAQEQATPTSSSAAAPLFIPQSVGAGPSS
RQAASHIPLLSPTSYKSFSDDVVLTSSMDGQVVLIDRRIPASEGAGVGVGRLMPGERAPP
WCMSACWSSNGTQVLAGRRNGMIDVWDVRRSSSSSSPNLLRTLRTPAESGPISCLVSFPD
ARHIATASQDNVRLWNTAEYFDNEDSMRKRSSKPPFKIIAGHHGGTLSSMIVDPTGRFLI
TASGDRGWQGESTKVVLIHEVKW
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcgacgatgaagatgacgaagacgagtattatgatgagaacgaggaggaagat
gacgagggattgaacggtgtcaatggagatgaagacgacggtgatggcgatgatgcaatg
gaggatggatcagacgatgatgcttctgatgcagatgaagatggagacgagggagaagaa
gatgacgaggacgaagatgaagagggagatgatgacaacgacgatgatgaggaggaggga
gaagacaacgaagaggaagaagaggacgagcaagatcaagaggctagtacagaggatgaa
ggtgaaggtgaagcggaaggggaagatggggatattgtaatggatggaatagatgaagaa
cctggctcaataaaacgatcaaggtcacgttctctgcaagaaatcacacctaataattta
ccaccaccacctcacatacttcgacggaatctcttcataccatcttacacttcctcaccg
aaatctctgtcgatagaagcgatagtcggcataccacttccttctcccgtgcattcccta
acatcgacgtcttgtctctcttatctgttagcaggaagccaagatggttatgtgagagta
tacgatttctggagtagtgtgaatggaggtcaaatgatgactgctcaacagcgaagtgtc
gtcggtctaggtgaaacagtcaataaagctggagtgggaagaggttggtgggcaaatgaa
gtagatggtataacaggcggatcggtcggtaaaagagcagaaccagtctatagtatggct
tgtgaaagtgacggattattcgctttaactggaacacagtctggcccaatcaaccttttt
actctgcggcatgcccctggacatcatgtacattccctaaaaggccacaccaatgtggtt
tcctgcatgtcgttattgcctagcgaaaaaggtcttttgagcggatcttgggacggtacc
gttcgagaatgggatttgaatactggtcagacagtgcgatcatatcctacacacggagcc
caactctcttccttgtcctttcgaccattcactcatccagcttctcctacaccttccccg
cgccgtcaatcggaaatcgacgaagatggcgaagaaattgatggggacatcaccacaaag
gaaaacatctccatctcaatgggactcgatttcttcagcaaagaagagactcaggacgaa
aatgcaactcaaaatgggctcccgatcaatgataacaatgagccaaccgaaagtcataca
gagatagatgcagtcaaagaagaagctatattgaatggcgacgttgaaatggctgaaacc
aagtcagaagccaaatcaccttcgatggattcgttattcggtggagatgatgatgttgat
gctgacgccgaaggtgaaactgtaccaccttcaattgtaccttcaaaagctccaacaccg
ttacgtgaaggaagtccaactgtaaattcgtcaagattgaaaggcttgggattagcttta
cctggtcaaccgaaaccacacgcgtcgccaacgacagcacaggaacaagctacaccgaca
tcttcgtctgcggcagcacctttattcattcctcaatcggttggagcaggtccatcgagt
cgtcaagcagcttcccacattcctttactcagtcctacatcctacaagtcattctcggat
gatgtggtcttgaccagctcaatggatggacaagtggttctgattgatcgacggatacct
gcgagcgaaggtgctggagtcggtgttgggcgcttaatgcctggagaaagagcaccgcca
tggtgtatgtccgcatgttggtcttctaatggaacacaagtactagctggaagaagaaat
ggtatgatagatgtatgggatgttcgacgatcatcttcatcttcctcgccaaaccttctg
agaactctaaggacaccagcagagtcaggtccgataagttgtttggtgtcgttcccagat
gcgagacatatagcaacggcttcacaagataatgttagattatggaatacagcagaatat
ttcgataatgaagatagtatgagaaagagaagttcaaagccaccttttaaaattatagct
ggtcatcacggtggtacattgtcttcgatgatcgtcgatccaacaggtagattcctgatc
acagcttcgggagatagaggatggcaaggtgaatcgactaaggtagtcctgatccatgaa
gtcaaatggtga
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integrated database retrieval system
