Kwoniella shivajii: 87957422
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Entry
87957422 CDS
T10982
Symbol
IL334_005291
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87957422 (IL334_005291)
Spliceosome [BR:
ksh03041
]
Common components
Common spliceosomal components
General mRNP proteins
87957422 (IL334_005291)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
87957422
NCBI-ProteinID:
XP_062793055
LinkDB
All DBs
Position
7:complement(join(464184..464318,464372..464477,464527..464592,464641..464815,464862..464964,465010..465247,465297..465385,465441..465492,465537..465844,465910..466492,466552..466619))
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AA seq
640 aa
AA seq
DB search
MSDTPPPDAAPVSGRDRTPELVSSREKRRREDEEDDRDNQRDRSNANRSGRRHRDDDERD
RDRDRDRDRERERERRHRRHREDETEEERRERHRRRDEETEEERRDRRRRREEETEEERD
ERHKRRKDREVMIDHKIRRESREISLGSTNRHSHHQQRDRSRESHGSSSHRPPRDDDRPS
IKEMTREEKEAEREKRDQEMAEEKREAARLREAKFAEMDRERELERRRLRDEERGPRDRS
PPRRRRGSPSYSSPAPPPPRDPATALLDEVEREQRSIFVSQLSARLTSHDLGMFFEDKLG
RGAVRDARIVTDKVSRRSKGIGYVELDAVELVHRALTLTGTIVLGLPINIMLTESERNRE
TTASSAPVVGSDGQVRPAVTFGQNFPPLSTGLAVPPGLDVDAHKDGAIPYHRLFISNLAF
SLSSDDLRQVFEPFGEIEFVDLHIDFSGMKKGTAYVQFKDLRAAQMALDAMAGFELAGRP
IRVQTVQDRAYVATEQIEDNGNYGTRLDANQRQQLMFKLARTEPNVNLALSAHKPIAIPS
KTPQMNPTPFVIVSNMFNPEEETERNWDLDLAEDVKGEVESKYGKVNRIKVEKMSAGEVY
IEFGEIDGATSAIKGLNGRFFGGRQLQASYISETLFKAHL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacaccaccacctgatgcggctcctgtcagtgggagagatagaacaccagag
ctagtcagttcccgtgagaaacgtcgtcgtgaagacgaagaagatgatcgtgacaatcaa
cgtgataggtccaatgcgaatcgatcaggtcgaagacatcgtgacgatgacgaaagagat
cgagaccgagaccgagaccgagatcgagaaagagaaagagaaagaagacatcgacgacat
cgcgaggacgaaaccgaagaagaacgtcgagagagacatcgacgaagggacgaagagact
gaagaagaaagaagggatagacgtagaaggagagaagaagagacagaagaagaaagagat
gaacgtcataaaagacgaaaagacagggaggtaatgattgatcacaaaataagacgggaa
tctagagaaatctcacttggttccacaaatagacattcacatcatcaacaacgtgataga
tcaagagaatctcatggttcatcgagtcatagaccaccaagagacgatgatagaccttct
atcaaagaaatgacaagggaagaaaaagaagctgaaagagaaaagagggatcaagaaatg
gcagaggaaaaaagagaagctgccagattgagagaagccaaatttgcagagatggacaga
gaacgtgagcttgaaagaagaagattgcgcgatgaagaaagaggtccaagagaccgttca
cctcctcgaagaagaagaggctcaccttcttacagttcacctgcgcctccaccaccacga
gatccagccactgctttgttggacgaggtggaaagggaacaaaggtccatctttgtctcg
caactatcggcgagattgacttcacatgatttaggaatgttcttcgaggataaattggga
agaggtgctgtcagagatgctagaatcgtcacggataaggtgtccaggaggtccaagggt
attgggtatgtcgagctggatgcggttgaacttgttcacagggctctgacactcaccgga
acgatcgtcttgggtctgccgatcaatatcatgcttaccgaatctgagcgaaacagagag
acgaccgcgtcttctgctcctgttgttggctcagatggacaggtgcgaccagcagtgaca
ttcggccaaaacttcccacctctctccactggtcttgccgtacctcctggtttagatgtt
gatgcgcataaagacggtgctattccttatcaccgattgttcatctccaaccttgcattc
agtctttcgtcagacgaccttcgacaagttttcgagccatttggagagatcgaatttgtc
gatcttcatattgacttttctggtatgaaaaaaggaactgcatacgttcaattcaaagat
cttcgagcggcgcaaatggctcttgatgcgatggctgggtttgagcttgctggtagacca
atccgagtgcaaaccgttcaagaccgagcttatgtagctactgagcaaattgaggataac
ggaaactacggaactagactcgatgccaatcaacgtcaacagctcatgtttaagcttgct
aggaccgaaccgaacgtcaacttggccttgtctgcgcataaacctattgctataccctcc
aaaactcctcaaatgaaccccacaccattcgtcattgtcagcaacatgtttaaccctgaa
gaggagaccgaacgaaattgggatctcgatctcgccgaagatgtcaaaggcgaagtcgag
tctaaatatggcaaagtcaaccggatcaaagtggagaagatgtcagcgggcgaagtgtat
atcgaattcggcgagattgatggcgctacatccgctataaaagggttgaacggaaggttc
tttggtggaagacaattacaggcttcttatatatctgaaacgttattcaaagctcacttg
tag
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