Kwoniella shivajii: 87957425
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Entry
87957425 CDS
T10982
Symbol
IL334_005294
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ksh Kwoniella shivajii
Pathway
ksh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
87957425 (IL334_005294)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksh03021
]
87957425 (IL334_005294)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87957425 (IL334_005294)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
87957425 (IL334_005294)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
87957425 (IL334_005294)
PBAF complex
87957425 (IL334_005294)
GBAF(ncBAF) complex
87957425 (IL334_005294)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
RelB-like
AAA_13
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
87957425
NCBI-ProteinID:
XP_062793058
LinkDB
All DBs
Position
7:complement(join(469545..470936,470987..471417,471527..471740))
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AA seq
678 aa
AA seq
DB search
MSTPKISIRVSTPGGPSESTATPVENTTEATGDVTTHDVATAPGKEREREPIYSGEIGNI
SGAGEREGVNGESSTSAQPADEAMETSIPAVDGEAPTPAPEPAERPTPQQLHDLATTYLA
AQTHPLVIPSYSSWFSLSTIHPIERRSLPEFFSSRNRSKTPAIYKDYRDFMINTYRLNPG
EYLTVTACRRNLAGDVGAIMRVHAFLEQWGLINYQVDPDTRPAALGPPFTGHFRVTLDTP
KGLSNLVHPGTRPNTGALSLTAQTNGVTPHPSNIDLRKTIYHSTSKSSKSISSSDATKIA
SSVNGDQPKTQSFACETCGTDCTRTRYHSIKDGEYTLCPTCFVSGRFPSTMFSGDFVRLD
EETFKHSSTGMGAEWSDQETLLLLEGVEMFDDDWQNVSEHVGTRSKEQCISKFLQLPIED
PYLTSDPAADLGPLRYQAGMNGLPFESSENPVMSVVTFLASTVSPAVAAAAAQSALGELS
KGLKRKRGDGEKGSDKEKAVKSEQPEGDKMVVDGEQAETADNDAEENGGSPSAPTSSDLS
RAATLALSSAAAKASSLASHEDHRISQLVSRLVSAQVKKVELKLSLFEKLEEALENEKRN
IELSRQQLFKDKLNVNKQLEKVQDLLKQAKENPVNGEAEINQIKQDSVTHSTADSIQQVH
GINQVPQLPAGESNLQKL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctaaaatatccattcgtgtgtcaacacctggtggtccatccgaatctaca
gccacacccgttgaaaacacgacggaagcgactggagacgtcacgactcacgatgtagcg
actgctcctggcaaagaacgggaaagagaacctatatacagtggggagattggaaatata
agtggtgctggtgaacgtgaaggtgtcaacggagaatcatcaacctctgctcagcccgcc
gacgaagcaatggaaacatccattccagccgttgatggcgaagcacccacacccgctcct
gaacctgcagaaagaccgacaccccaacaactacatgatctggcaacaacctacttggca
gctcaaacacacccccttgtcatcccatcgtactcgtcgtggttctcactgtcaaccata
cacccaatcgaaagaagatcattacccgagttcttctcttctaggaatagaagtaaaaca
cctgcgatatataaagattatagagatttcatgatcaacacttatcgtttgaatccagga
gaatacctcactgtcactgcttgtaggaggaatttggcaggtgatgtaggtgcgattatg
agagtacatgctttcttggaacaatggggtttgataaattatcaggtggacccggatacc
cgaccagctgctcttggccctcccttcactggccacttcagagtcacccttgatactcct
aaaggtctgtccaatttggttcaccccggtacaagaccaaacaccggtgcattatcactc
acagctcagaccaatggtgtaactcctcacccatccaacatcgatcttcgcaaaacaatc
tatcattccacttcaaaatcatccaaatccatctcttctagcgatgcaaccaaaatcgcc
tcgtcagtcaacggcgatcaacctaaaacacaatcgttcgcttgcgaaacttgtgggact
gactgtactcgaacacgatatcattcgatcaaagatggggaatatacattatgtccaacg
tgtttcgtatctggtcgtttcccatctacaatgttctcaggagatttcgtcagactcgat
gaagagactttcaagcattcttccactgggatgggagctgaatggtcggatcaagaaact
ttactattgttagaaggtgtcgagatgtttgatgatgattggcaaaatgtctcagaacat
gttggaacaagatcaaaagaacaatgtatatcgaagttcttacaattacctatagaagat
ccatatttgacatcggacccagcggctgatcttggcccgttgagatatcaagctggaatg
aatggattgccatttgagtcgagtgaaaacccggtgatgtcagtggtcactttcttagct
tctacggtgtcacctgctgtagctgccgcagcggctcaaagtgctttaggagaactgtca
aagggccttaagaggaaaagaggtgatggagagaaaggtagcgacaaggagaaagctgtg
aagtcggaacagccagaaggagacaagatggtggtcgacggagaacaagctgagacggcc
gacaatgacgcagaagagaacggcggatcaccttcagcccctacatcgtctgacttatca
agagcggcgactttggcattatcgtcagcagcagctaaagcatcatcattagcttcacac
gaagatcacagaatatcacagttagtgtcaagattagtttcagctcaagtcaaaaaagtc
gaattaaaattgtcattatttgagaaactcgaagaggcattagagaatgaaaagagaaat
atcgaattgagtagacaacaattgttcaaggataaattgaatgtcaataaacaattggaa
aaagtacaagatttgttgaaacaagcaaaggagaatccagtcaatggggaagcagagatt
aatcaaattaaacaagattcagtcactcattctacagctgattcgatacaacaagtccac
gggataaatcaagttccacaattacctgcaggcgaatcgaatttgcaaaagttgtaa
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