Kwoniella shivajii: 87957604
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Entry
87957604 CDS
T10982
Symbol
IL334_005473
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
ksh Kwoniella shivajii
Pathway
ksh03030
DNA replication
ksh03410
Base excision repair
ksh03420
Nucleotide excision repair
ksh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87957604 (IL334_005473)
03410 Base excision repair
87957604 (IL334_005473)
03420 Nucleotide excision repair
87957604 (IL334_005473)
03430 Mismatch repair
87957604 (IL334_005473)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksh03032
]
87957604 (IL334_005473)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87957604 (IL334_005473)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87957604 (IL334_005473)
DNA replication proteins [BR:
ksh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87957604 (IL334_005473)
DNA Replication Termination Factors
ELG1-RFC complex
87957604 (IL334_005473)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87957604 (IL334_005473)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87957604 (IL334_005473)
Check point factors
HRAD17(Rad24)-RFC complex
87957604 (IL334_005473)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
AAA_3
nSTAND3
Viral_helicase1
RuvB_N
Gp44_lid
Mg_chelatase
Rad17
NTPase_1
MeaB
FtsK_SpoIIIE
DNAX_ATPase_lid
AAA_24
AAA_19
AAA_assoc_2
AAA_5
MCM
AAA_18
ANAPC10
AAA_23
KTI12
AAA_30
RNA_helicase
AAA_28
Motif
Other DBs
NCBI-GeneID:
87957604
NCBI-ProteinID:
XP_062793237
LinkDB
All DBs
Position
7:join(939370..939449,939623..939734,939905..940011,940153..940254,940320..940515,940667..940993,941144..941260)
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AA seq
346 aa
AA seq
DB search
MASSSKGTEAVSAIAKHIDAEGYEMPWVEKYRPVLLQDIVGNSETVERLKVIAEDGNVPH
IIISGMPGIGKTTSIHCLAHALLGDAYREGVLELNASDERGIDVVRNKIKSFAQRKVTLP
SGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAILRYS
KLKDAEVLKRLKEICEMENVKHNDQGLAALIFTAEGDMRQAINNLQSTWSGFGFVSQDNV
FKICDQPHPIVIRQMIKDCQSGNVDDALARINGLWDQGYSAVDIVVSVFRVTKGMEELQE
YMKLEFIKEIGWTHMRILEGVGTLVQLGAMVSRLCKLSLPPQALKL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcatcaaaaggtacagaagctgtatcggcaatagcgaaacatatcgatgcg
gaaggatatgaaatgccatgggtcgaaaaatatcgtccagtcttattacaagatatagtt
ggaaattcagaaactgtagaaaggttaaaagtgatagctgaagatggtaatgttccacat
ataattatatctgggatgccaggtataggtaaaaccacctcgatacattgtttagcacat
gctttattaggtgatgcttatagagaaggagtattggaattgaatgcttctgatgagaga
ggtattgacgtcgtaaggaataaaatcaaatcattcgctcagagaaaagttacattacca
agtggaagacataagataatcatcctagatgaagctgattcgatgacagctggtgctcaa
caagcgttaagaagaacgatggagatctactcaaatactacacgattcgctctagcttgt
aatatgtcaaataagattatagaacctattcaatctagatgtgctattctcagatactca
aagttgaaagatgcagaagtgttgaaaaggttgaaagagatttgcgagatggaaaatgtc
aaacacaacgatcaaggattggcagcattgatctttacggcggaaggagatatgagacaa
gctataaataatttacaatcgacatggtcaggattcggattcgtctcacaagataacgtt
ttcaaaatttgtgatcaacctcatccgatagtaatcagacaaatgatcaaagattgtcaa
agtggtaatgtagatgatgcattagctagaataaatggtttatgggatcaaggctattca
gctgttgatatagtcgtttcagtctttagagtcacgaaaggaatggaagaactacaagaa
tatatgaaattggaatttataaaagaaatcggatggacacatatgcgtatactcgaaggt
gttggaactctcgttcaattaggagcaatggtatctagattgtgtaaactcagtttacca
cctcaagcactgaagttatag
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