Kwoniella shivajii: 87957994
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Entry
87957994 CDS
T10982
Symbol
IL334_005864
Name
(RefSeq) uncharacterized protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
87957994 (IL334_005864)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87957994 (IL334_005864)
03009 Ribosome biogenesis [BR:
ksh03009
]
87957994 (IL334_005864)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87957994 (IL334_005864)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
87957994 (IL334_005864)
Messenger RNA biogenesis [BR:
ksh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
87957994 (IL334_005864)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
90S particles
RNase
87957994 (IL334_005864)
Prokaryotic type
rRNA processing factors
87957994 (IL334_005864)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
87957994 (IL334_005864)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
RM44_endonuclase
dsrm
Motif
Other DBs
NCBI-GeneID:
87957994
NCBI-ProteinID:
XP_062793622
LinkDB
All DBs
Position
8:complement(join(265304..265406,265529..266112,266198..266259,266468..266681))
Genome browser
AA seq
320 aa
AA seq
DB search
MAEKALESLSISTLPSFPLPPLPEILDTEIARKVYTHSSFIARPKGSSQLFECEDEGRDN
EKLEHLGDSLLDCAVVGLLQDLYPNLNPGVATLLKSHMVNNETLRQICKSYHLHERLIAP
EQALPTLRNGEKVLANLFEAYIAGVYYSYLKHGRSNHTGHPHFQPLSSSSSSSSPSSSSS
RTSSPGKAVTRGEAMDNLELWLRPLFTPLAQHILNQMKEEQRQRHSLTVGDIGEDSDTDR
KAIGANSKLNQWFTAKEGGIPNYPPHAAGSEGWTVMCEATDRDKQKWYGEATRSTKKAAM
AVAAYKVIVQFEKVRPEFKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagctctggaatcactttcgatctccaccctaccttcatttccattacca
cctttaccagagattctagatactgaaattgcaagaaaagtatacacacattcaagtttt
atcgctagacctaaaggatcttcacagcttttcgaatgtgaagacgagggtagagacaac
gagaaattggaacatttaggtgatagcttgctagattgcgctgtggtcggactattgcaa
gatctgtatcccaatctcaaccccggtgtggctactcttcttaaatcccatatggtcaat
aacgaaacacttcgacagatatgtaaatcataccatttacatgagaggttgattgcacct
gaacaagctttacctactttgcgaaatggagaaaaagtattagcgaatctattcgaagct
tatatagctggtgtttattattcttatctgaaacatggccgtagtaatcacaccggacat
cctcatttccaaccattatcttcttcttcctcatcatcatcgccatcatcatcttcttcg
agaacttcttcacctggtaaagctgtaacaagaggagaagcaatggacaatcttgagtta
tggttaagacccttgttcactccgttagctcaacatatcttgaatcaaatgaaagaagaa
caacgtcaaaggcattcattgactgttggtgacataggtgaagattcagatacagatagg
aaagctataggtgccaactcaaaattgaaccaatggttcactgctaaagaaggtggtata
ccaaattaccccccacacgcagcaggctcggaaggttggacagtgatgtgtgaagcgacg
gacagggataaacagaagtggtacggagaagctactcgctcaactaagaaagcggccatg
gcagtggcggcgtacaaagtgatcgtccagttcgagaaagttagaccagaattcaagggg
tga
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