Kwoniella shivajii: 87958042
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Entry
87958042 CDS
T10982
Symbol
IL334_005912
Name
(RefSeq) uncharacterized protein
KO
K13103
tuftelin-interacting protein 11
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87958042 (IL334_005912)
Spliceosome [BR:
ksh03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
87958042 (IL334_005912)
Other components
Complex C specific factors
87958042 (IL334_005912)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
Motif
Other DBs
NCBI-GeneID:
87958042
NCBI-ProteinID:
XP_062793669
LinkDB
All DBs
Position
8:join(380700..380983,381056..382088,382143..382368,382421..382611,382663..382913,382965..383292,383344..383606,383667..384144)
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AA seq
1017 aa
AA seq
DB search
MPRRKNAFLSDGSDSEASDSGASIADYDSQEDGDSRAERRLFEHKDKKRKTGNRGGKESA
WEGIFGDEPEDGHGGRGLGSRNKGSAGPHRTDWTKAPSFVSSGPSKPSDTLEENDLPEAP
SPDDDVDVEDDSEGSSGSTEDEEEGASRQRSPRIRDEEEEDQPPRSMGLGSHNGFAPAGS
APIPEQEVESKKPTGGRGGIGSGARGRGGIGSSSRDARASPPLPAESSRQGPRGGLGSSG
APANPIDESAPSNNVPSAFGRPPPQLTASSGPSRKQQSFVSRKAPTAPAKTAAELTATER
AHFANISSSFGARLLAKQGWEAGKGLGVQEDGRAIPIQVGKVLKGKGIQSGMRTEDSKRE
ARRKGEVFSDDEDEQPQRRRDKGTKATKEPKGEVEQGWKKQKKVKVKVEHKTYEQLLAEA
GDAAPLAGLGLVLDARGGELKEVQSLSSLSLSTWTPTSDNMKLPELRHNLRLIVDVAKGD
VEGLVREGKSVNERRRWALREEQVSRAKVEEAESRISRIKQIQSLVETIASTAAEQSITA
NPSLTPLVESFNSLIIGFQDEYKSHSLDDIVVAAIAQVTRRAFAEWEPFDVSTDILLSSL
KTWRKAYNLPKAEDLGVDLAAINGSEANGQSNRKVEIGKRTMTAWESLLWSLWLPKVRSA
INNDWDPSSPHAAVHLMESWEPILPAFIRDNILDQLVLPKVKTAIDQWDPRKAKHSKHPR
SLASIVFPWLPLLGERGEDMLEGAKRRIRSVLRNWVVKDGVPEELVRWKKDVYSSSEWDK
LIIQFVLPKLGVCLRDDFTVNPRKQDMVPLEDWIMPWHKLLRQSMFSHLLEVEFFQKWLD
ILYIWLIQPAYKPDEVANWFVWWKGRFPEEVLDMRGINHGFNSGLELMDQAMKFGSEAPH
RLVKPTFVPLPPSTNSSGKLRPSKTKPVETKKPIEQADITFRNIAEDYASQHDLIFLPIG
KSHDRTGKPLFKISKNVDGRGGLTIYIGDNAVFAQFDDGSYRAVSLEDMVKKASGGM
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaggaagaacgccttcctgtcagatggctcggactctgaggcgtccgattct
ggcgcttccatagccgattacgattctcaagaagacggcgattctcgagctgaaagaagg
ttgtttgagcacaaggataagaaacgcaagactggaaacagaggtgggaaagaatctgca
tgggaaggtatatttggtgatgagcctgaagatggacatggcggaagaggattaggatcc
agaaataaaggatcggctggacctcatagaacagattggacgaaagcaccatcgtttgta
tcttctggcccgtctaagccctcagatacactggaagagaacgatctgcctgaagcaccc
tcaccagatgacgacgttgatgtcgaagacgattccgaagggagttccggctcaacagaa
gatgaagaagaaggagcgtctcgtcagcgttcgcctcgtatacgagatgaagaggaagaa
gatcaaccgcctagaagcatgggtctgggttctcacaatggatttgctcctgcaggttct
gcaccaatacctgaacaagaagttgagtccaaaaagccgacgggtggaagaggtgggata
ggatcaggcgctcgtggtagaggagggattggatcatcaagtcgagacgccagagcatcg
ccgccacttccggcagaaagctccaggcaaggcccacgaggaggcttaggatcatcaggg
gcgcccgccaatcctatagatgagtctgctccctcaaataacgttccatctgcctttggt
cgaccaccgcctcaactaacagcgtcatccggtccttctcgtaaacagcagtcctttgta
tcacggaaagcacccactgctcctgcaaaaacggctgctgaactcactgcgactgaacgt
gcacattttgccaacatttcctcgtctttcggtgctaggttattagccaagcaaggttgg
gaggcaggtaagggtctaggtgtacaagaggatggtcgagcgataccaatccaggttggg
aaagttttgaaaggcaaaggtatacagagtgggatgagaacggaggatagtaagagggaa
gcacggaggaaaggggaagtcttctcagatgatgaggatgagcaaccccaaagacgtcgc
gataaaggcacaaaagcgacaaaagaaccaaaaggagaggtagaacaagggtggaagaag
cagaaaaaggtcaaagtcaaggtggaacacaagacttatgaacaattacttgctgaagct
ggagatgcagctccgctagcaggattgggtctggtgttggatgcgagaggaggggagctg
aaagaggttcaatctctatcgtcattatcgctttcgacttggacaccgacttccgataat
atgaaattaccagaactgcggcacaatcttcgtttgattgtcgacgttgctaaaggggat
gtcgaaggtttggtaagggaaggaaagtctgtcaatgaaagaaggagatgggctttacgt
gaggagcaggtatcgcgtgcgaaagtcgaagaagcggaaagtcgtatatctcgtatcaaa
cagatacaatcccttgtggagactattgcatcgacagctgctgagcaatccataacggcg
aatccatctttgactcccctagtcgaaagtttcaactcactcattatcgggttccaagac
gaatacaaatctcactctttggacgacattgtcgttgcagctattgctcaagtaactcga
cgtgctttcgctgaatgggaacctttcgatgtctcaacagacatcttactgtcttccctc
aaaacttggcgcaaggcatacaatttacctaaagccgaggatctaggtgttgatctcgca
gccatcaatggctcggaagcgaatggtcaatcaaatcgcaaagttgaaattggaaagaga
acgatgacggcctgggaaagcttgctatggtctttatggttgcccaaagtccgctcagcc
atcaacaatgattgggatccaagctcgcctcacgctgctgttcacctaatggagtcatgg
gaaccaatcttacctgctttcatacgtgataacattctcgatcagctggtactgcccaaa
gtcaaaacagctatagatcaatgggatccgagaaaagcgaaacattccaaacatcccaga
tcccttgccagtatcgtctttccctggttgcccttgttgggtgaaagaggagaagatatg
cttgaaggagccaaacgacgcatacgatctgttttgcgcaattgggtcgtcaaagacggg
gtgccagaagagcttgtccgatggaagaaggatgtttattcgtcgagcgaatgggataaa
ctcatcattcaattcgtgctacccaaactcggcgtctgcttgcgagacgacttcactgtc
aatccaagaaagcaagacatggtaccactggaagactggattatgccttggcacaagctt
cttcgacagtcaatgttctcacatctcttggaagtggaatttttccagaaatggctggat
atactgtacatctggcttattcagcctgcttacaaacccgacgaagtagccaattggttt
gtttggtggaaaggccgattccctgaagaagtcctggacatgcgaggaattaatcacggt
ttcaacagcggtttggaattgatggatcaagccatgaaattcggttctgaagcaccacat
agacttgtcaaaccaacgttcgttccattaccgccttctaccaattcaagtggcaaattg
agaccatccaaaaccaaacccgttgaaacgaagaaaccgatcgaacaggcagatataaca
ttcaggaatatcgcagaagattacgcaagtcaacatgatttgatcttcttaccaataggc
aaatcccacgatagaacgggtaaacctctgttcaagatatccaaaaatgttgacggccgt
ggtggtctcaccatctatatcggcgacaacgccgttttcgcccaattcgacgatggtagt
tatagagctgtatctttggaagatatggtgaagaaagctagtggaggaatgtag
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