KEGG   Kwoniella shivajii: 87958083
Entry
87958083          CDS       T10982                                 
Symbol
IL334_005953
Name
(RefSeq) uncharacterized protein
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ksh  Kwoniella shivajii
Pathway
ksh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87958083 (IL334_005953)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ksh03041]
    87958083 (IL334_005953)
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87958083 (IL334_005953)
Spliceosome [BR:ksh03041]
 Complex B
  Other components
   Prp19 complex
    87958083 (IL334_005953)
 Complex C
   Prp19-CDC5 complex
    87958083 (IL334_005953)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    87958083 (IL334_005953)
SSDB
Motif
Pfam: BCAS2 ZapB GAS bZIP_1 ATG16 GIT_CC Spectrin NET2A NPV_P10 Baculo_PEP_C PI3K_P85_iSH2 SKA2 DUF7310 DASH_Spc19 Laminin_II HALZ FapA DASH_Hsk3
Other DBs
NCBI-GeneID: 87958083
NCBI-ProteinID: XP_062793710
LinkDB
Position
8:complement(join(498208..498529,498620..498786,498880..499044))
AA seq 217 aa
MSSLSYIDALPYYDKQLDDPSAKAAAQALIEAELRKTPQINDDDERLPRTIEVFPKSTEL
SALLDGYPSKPIRGIDTSKYQPPTIGEEPTLDELEKAEKQSRIGEGHMALRIENTSILSS
HGPNAWLIRNYQLNSQLTELQSSLNNLKENVTDVNRSRRVFQEDTGKHLSKLESRWQDLI
GSTVQLEMACKAMEGEVKPLRRKHESLKEEVESLEKQ
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcctctttaagctatatagacgctctaccatactacgacaagcaactagacgatcca
tcagcaaaagcagcagctcaagctttgatagaagctgaactgagaaagactcctcaaata
aacgatgatgatgagagattaccaaggacgatagaagtatttcctaaatcaaccgaacta
tcagcattattagatggatatccatcaaaaccaataagaggtattgatacatcgaaatat
caacctccaactataggtgaagaacccactttagatgagttggagaaggcggaaaaacaa
agtaggataggagaaggccatatggctttaagaatcgaaaatacatcaatactctcatct
cacggaccaaatgcatggttgattcgaaactatcaattgaattcacagttaacagaatta
caatcttccctgaacaatttgaaagagaatgtgacggatgtcaatagatcaagaagggtt
ttccaagaagatacaggaaaacatttaagtaaattagaaagtagatggcaagacttaata
ggttcaactgtacagttagaaatggcatgtaaagctatggaaggtgaagtcaaaccatta
agaagaaaacatgaatcattaaaagaagaagttgaatcattagagaaacaataa

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