Kwoniella shivajii: 87958322
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Entry
87958322 CDS
T10982
Symbol
IL334_006192
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87958322 (IL334_006192)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87958322 (IL334_006192)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87958322 (IL334_006192)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
87958322
NCBI-ProteinID:
XP_062793947
UniProt:
A0ABZ1D5W8
LinkDB
All DBs
Position
8:complement(join(1212261..1214185,1214248..1216528,1216581..1216672,1216726..1217372,1217441..1218025,1218091..1218146))
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AA seq
1861 aa
AA seq
DB search
MVQPQAGPSTALELEDYLCPLTTIRDTLLRSDSSTVSIPKLRALLSWHKKRLTTPWTPFS
NPSSNSRSTISKSSFTLPHSSVTVQVDEPTRSLALRLSDRLGIDEISSFMLVKSYQTFSL
DEVDLDKAEAEEKDHILERIILWYSEEVVATPQIVLAILKISDDEGELGQLANDVRIEVI
DDTSKYIEGAFRAFSNLAQRDLHDGERGVHALFWVTHQLRLQEQLVTLLFVLLYQTPNRS
AEISEGLTRGTVMSSFGTSQANREIWENDMECQKISIRIRDLILLISLEALCLSQVVSPS
EPIEEIDGTLLQNKQKVLSVHEFLADYSSDLAPHYPEYEPGAVPLPIWPMSIICLAWAII
IRSLPSDIAPAGGDGVITWQDMAIRALRLPSGLFPWLEVILSGPLLGSTRDIPGDIATGS
GLFQRKVLKDLLIGLSELVQLESIADRPGLYRAWELVFGEGSKSTSSLLAADYWIADFPY
DERRSILDRSQFPYQPAHLPRLLSSLVGSGSSETSSDVFGTDPAAQVQHYFSNLPTITHT
VESSWCKYLGKDDMGKESVEAVKTLILPGGASIPRGSKGFIIATKTLTQVMWTNQIISGW
SLLLEILQAAAGLKSADERSPANGSHPPDSIYLSVRDLDMQLDTSEILAAGIKFFHSVLQ
SSSYIKATILTQLNPDHHLTSGQSLLHLALTVLQHSKTTEFTLESSVVSDAVNIIQSLIT
APESNIWPALRSSGFFDAGGKKRGSVAGLIQADSVKGEHVLTASVLSLVYTLVINADHIP
DSDIVILRSALHLVFADIWNNFSAWRYKDVAKKYELSSLLVGIFDTVLSHPLSSDGSGPT
PAAQVLIDLFITSTSPLTYRPLVDAITQASYLIPRLIGSRRHVDAEMVVQCLDETLLFMG
TLFRISSMIGTSATALPKSLFALPIAIPSGDKIQLVDALFDISLSPSAQTSNVTNILKTL
RVYLETIGQDSHRPSLASMLRSPSRTCESLSDLATKMNDLDVRAAVWDLLSTMVSTQPGC
VQACIGSVNADGMEGTLKVAVDEITSWEVSFRESPHTLSAVLNYLQSIMRAAGADKAITH
LRKDSDFWQSIFDLSTRIVPAPPSFSLSMHADDFTSRIQRYAYSVQAKANATSLLASELA
YALDNDDDDLPETKARMLVLSLFRNNSALQEASLMASHNSCVPELHADQGKRITANGGNL
VRLKTIKLNSEREYGRAYLYDGTVVVQSSATQQSTVNLALDLLNLNWSMLDADISLTRSF
RQLAEAISSWTEGDSLATNAALKAGVSISEVISEEYRGGDVMFAVQVERLSILAVVLETA
LDVQEEKQPNPEFVQQLASSMVVIVNSQSFPPVVSLRHPDLPAIHQPVLRILYLLLQAMS
NSEATTSNVTSRESLVDAGTIFALESADVVFDIINRGIRSTFSGNLSMIIEVLCELSKLS
STTGNAAWLDKVQGFNVIGRSLEVLIRARIVNDQLPIHLSSVLLLHLSLAGNPTTAEKLA
VLGILPGYSDNAIVVQAEHGKIISPNSFGNSTHDIWCGMLLVVKTLLSTLPDTFSFTKTD
VIPFIRVVNRQMLKSMSWDGETPLSLPALTELELVLDVFYGIVNALGPGCLADYQGQAIN
LLKSTRYALSHPRLLSTLYIPSSEEEKFNLDKEIQTLEEEGEINLFDYDKTPILAGRSTA
LLRIIRTIILTLVGLTRSWQTLKEDNLDPIEIDKYILISDEDDSTSSSDPIGIFNDIYLI
TSTISDRLPAKSTNNNNNREIEEISSLRNLTTQLLESTSLLSLTQILLRQSLLPPDEKHD
ESMEIDIPSNKSRRISGGSGGSREGMILRELQSDFKSMMGNESGMRGVLKRWAEKSFGGD
N
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggtccaacctcaagcaggaccatcgacagcattagagctagaggactacctgtgtcca
ctgacaacgattcgagatacacttcttcgttctgattcttcaaccgtttccatacctaaa
ctcagagcattgctatcgtggcacaagaagagattaacaacaccatggacgcctttctcc
aatccttcctcaaattccagatcaacaatatccaaatcatctttcaccctccctcattca
tcggtaactgtacaggttgatgagcccacacgttcactcgcattgagattgtcagacaga
ttgggaatagacgaaatatcaagcttcatgttagtgaaatcataccaaacattcagctta
gatgaggtcgatctggataaagcagaagcagaagaaaaggatcacatactagaaaggata
atactatggtattctgaagaagttgtagctacacctcaaatcgttttagctatactgaag
atctcagacgatgaaggagaactaggtcaattagcaaatgatgtaagaatcgaggtgatc
gatgatacgtcaaaatatattgaaggtgcctttagagcgtttagtaatctggctcaaaga
gacctgcatgacggtgagcggggtgttcatgcgcttttctgggttacacatcaattacga
ttacaagaacaactagtgacattgttgttcgtccttttataccaaacacccaatcgttca
gcagagatctccgaaggacttacaagagggactgtcatgtcatcatttggcacatcacaa
gctaatcgagaaatatgggaaaatgacatggaatgtcaaaaaatcagtatacgcataaga
gatttgatactattgatttcgttagaagctttgtgtctaagtcaagtcgtatctccatct
gaaccaattgaagaaatagacggaacgcttttacagaataaacagaaagttttatcggta
cacgaattcttagcagattattcaagtgatttggctcctcattatcctgaatacgaacct
ggagcagtaccccttcctatttggccaatgtcgatcatctgcttagcatgggcaatcatc
attagatcgttaccgagtgatatagctcctgcgggtggggatggtgtgataacttggcag
gatatggctattagggctcttagattaccatcaggtctgttcccttggttggaggtcata
ctatctggaccactattaggctccacaagagatataccgggagatatagctacaggctcg
ggtctgttccagagaaaagtgctcaaggatctgctgattggcctttctgaacttgtacaa
ctggaaagtatcgccgatagaccgggtttatatcgagcttgggagcttgtctttggcgaa
ggctcaaagtccacatcttccctcctcgccgctgattactggattgcggatttcccctac
gacgagagacgatcaatacttgatcgcagtcaatttccttatcagccggctcatctccct
cgactactatcttcactggtagggtcaggatcatcggaaacatcgtcagacgtattcggt
accgacccagcggcgcaggtacaacattacttctccaatctgcctactataactcacact
gtcgaatcgtcatggtgcaagtatcttggcaaagacgatatggggaaggaatcagtcgaa
gcggtaaaaactctgatattacctggaggtgcgagcatacctcgagggtcaaaaggcttc
atcatagcaaccaaaactttaactcaagtcatgtggacgaaccaaatcatctctggatgg
tcattactccttgaaatccttcaagccgccgctggactgaaatctgctgatgagcgatca
cctgcaaatggttctcatccaccagatagtatctatctatccgtgagagacctcgacatg
cagctcgacacatccgagatactggcagccggcattaaattcttccattcagtcctgcaa
tcatcatcatatatcaaagcgacgatactcactcagctcaatcccgaccatcaccttaca
tctggtcaatctcttctacatctcgctcttactgtccttcaacacagcaaaacaactgag
ttcactttagaatcgtcagtcgtgtctgatgcggtcaacattatacaatctttaatcacc
gctccggaaagcaacatatggcccgctttgaggtcttccggcttcttcgacgccggtggt
aagaaacgaggaagtgttgctggtctgattcaagcggactctgtgaaaggtgaacatgtg
cttacagcatcagtgttgagtttggtttacacgcttgtcatcaatgccgaccatatacca
gattcggatatagtgattttgcgatcagcattgcacctggtattcgcggatatatggaac
aacttctctgcttggagatataaagacgtggccaagaagtacgaattgtcttcccttctt
gtcggtatatttgacaccgtcctcagtcatcctttatcgtctgatggaagtggacctaca
cctgccgctcaggtattgattgacctattcatcacgtccacttcacccttgacgtaccgc
ccactagtagatgctatcacccaagctagctatttgatccctcgcctgatcggatccaga
cgacacgtagatgcggaaatggtagtacaatgtctggacgaaacactgttgtttatggga
acattgttccgcatatcctcgatgattggtacttccgctactgctttaccaaaatcactt
ttcgctctcccaatcgcaattccttccggtgataagatccagcttgtcgatgcgcttttc
gatatctctctttcgccttctgctcaaacaagcaatgttaccaacatcctaaagactctt
cgagtatatcttgaaacaatcggtcaagactcccatcgaccttccttggcgagtatgctt
cgcagcccctcgagaacatgtgaaagtctctcagaccttgccacgaagatgaatgattta
gatgttcgggcagcagtatgggatttactctcaacgatggtctccactcaacctggatgc
gtacaagcgtgtattgggtcggtaaatgccgatggaatggaagggacgctcaaagtcgcc
gttgatgagatcacatcgtgggaagtatcattccgagaatctcctcatactctttcagct
gtgctcaactatcttcaatcaataatgagagctgctggagcagataaagccattactcat
ttacgcaaagattccgatttttggcaatccatattcgatttatcaacaaggattgtaccc
gccccaccatctttctcgctttcgatgcatgcagacgacttcacctccagaatccaacga
tacgcttattccgtccaggcaaaagcaaatgctacctcccttttagcatcggaattggct
tatgccttagataatgacgatgatgacctacctgagactaaagctagaatgttggtttta
tctttattcaggaacaattcggctcttcaggaagccagtttaatggcaagtcataacagt
tgcgtccctgaattgcacgcagatcaagggaaaagaatcacagccaatggtggtaatcta
gtaagactgaagactatcaagctgaactccgaaagagaatatggaagagcatatttatac
gatggtactgttgtcgtgcaaagttcagcgacacaacaatcaacagtcaatcttgccctt
gacctattgaacctcaattggtcaatgctcgatgccgatatatcccttactcgatcattc
cgtcaattggcagaagcaatatcttcctggaccgaaggcgatagccttgccaccaatgcg
gctctcaaagctggtgtatctatctctgaagtcatttcagaggaatatcgcggaggtgat
gtgatgttcgctgttcaagtggagcgactgtctatcttggctgtcgtcctggaaactgct
ctggatgttcaagaagagaaacaacctaatcctgaattcgtacaacaacttgcttcttca
atggtcgttatcgtaaatagccagtcattcccaccggtggtatcattgagacatcccgac
cttccagcaattcatcaacctgtccttcggatattatacctattgcttcaagccatgtca
aactccgaagctaccacgtcaaacgtcacttctcgcgaatcactagtcgatgcagggacg
atattcgccctcgaatctgctgatgtagtcttcgacataatcaaccgcggaataagatct
actttctccggaaatctcagtatgatcatcgaagtcttgtgtgaactcagcaagttgtcc
tcaacgacaggaaatgcagcatggttggacaaagttcaaggcttcaatgtgattggaagg
tctctagaggttttgattcgagcaagaatagtgaacgatcaactaccaatacatctttca
agtgtcttgttgctacatctatcgctagctgggaatccaacaacagcagaaaagttggct
gtattaggtatattacctggatattcagataacgccattgtggtccaagctgaacacgga
aaaatcatttcacctaattcgtttggcaattcaacacatgatatctggtgtggaatgctg
ttggtcgtcaagactctcttatcgactttacccgatacgttttcattcaccaagacagat
gttatcccattcataagagtggtaaatcgacaaatgttgaaatcaatgtcatgggatggc
gaaactcccttatctctacctgctttaacggaacttgaattagtgttagacgtcttttat
gggattgtgaacgctttaggtccaggctgtttagctgattatcaaggtcaagcaatcaat
ctactgaaatcaactagatatgctctatcacatcctagattattatcaacgttatatata
ccttcttcggaagaagaaaagtttaatttggacaaagaaatacaaacgttagaagaagaa
ggtgaaatcaatttgtttgattacgacaaaaccccgatcttagctggtagatcaaccgct
ttattaaggattataagaacgatcatcttgactttagtaggattgactcgatcatggcaa
actttgaaagaagataacttggatccgatcgaaattgataaatatatcttgatttcagat
gaagacgactcaacttcttcttctgatccgatcggaattttcaatgatatatacttgatc
acctctactatctcagatagattgcctgccaaatcgacaaacaacaacaacaacagagaa
atagaggaaatctcttcactcaggaaccttacaactcagttactagaatcgacatcatta
ttgtctttgactcaaatattacttcgtcagtcactcttacctccagatgagaaacacgat
gaatccatggaaattgatataccttcgaacaaatcaaggaggatatcaggaggatcaggc
ggaagtagagaaggaatgatcttaagagaattacaaagtgattttaaatcaatgatgggt
aacgaatctggtatgagaggagtattgaaacgatgggcggagaaatcttttggaggggat
aattga
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