Kwoniella shivajii: 87958374
Help
Entry
87958374 CDS
T10982
Symbol
IL334_006244
Name
(RefSeq) ATP-dependent RNA helicase DBP2-A
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87958374 (IL334_006244)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87958374 (IL334_006244)
03009 Ribosome biogenesis [BR:
ksh03009
]
87958374 (IL334_006244)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87958374 (IL334_006244)
Spliceosome [BR:
ksh03041
]
Complex A
U1 snRNP components
U1 related factors
87958374 (IL334_006244)
Complex B
87958374 (IL334_006244)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
Pre-60S particles
Helicases
87958374 (IL334_006244)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
87958374
NCBI-ProteinID:
XP_062793999
LinkDB
All DBs
Position
8:join(1359924..1359926,1360006..1360090,1360172..1360192,1360308..1360401,1360456..1361406,1361469..1361560,1362155..1362185,1362247..1362399,1362456..1362651)
Genome browser
AA seq
541 aa
AA seq
DB search
MSYGGGSYGGGGGYGGGGGGGYGGGGGGYGGGGGSYGGGGGGDRMSNLGGGLHNIDWNSQ
TLTKFEKNFYVQDPRVTAKTDAEITAFRAEKTMKIQGQNVPRPITTFEEAGFPDYILSEI
RTMGFTAPSSIQCQAWPMALSGRDLVAVAETGSGKTISFALPAMVHINAQPLLAPGDGPV
VLILAPTRELAVQIQAECTRFGKSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLI
DMLESGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRL
AMDFLHDFIQVNIGSMDLTANHNVEQHVEICTDYDKRQKLLGHLEAISKENGKAIIFVGT
KRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKAGRSPIMLATDVASRGLDVKDI
GYVINYDFPNNCEDYIHRIGRTGRAGRKGVSYTYFTPDNSKQARELVTILRESKSEVSPE
LEQMAMYGGGGGGRGRGGGGRGGGRGGSRFGGGGGGGGYGSGSNSYGGGGGGGGGGYSSR
W
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggtggatcttacggcggcggtggtggatacggcggaggtggtggtggt
ggatacggcggaggtggcggtggttacggcggcggcggtggctcatacggtggtggtggt
ggcggtgacagaatgtccaacctcggtggtggtctccacaacatcgactggaacagtcaa
actctcaccaaattcgagaagaacttctacgttcaagatcctcgggttactgccaagaca
gacgctgaaatcacagcattccgagctgagaaaacaatgaagattcaaggtcaaaacgtt
cctcgacctattaccactttcgaggaagctggtttccctgattacattctctccgagatc
cgaaccatgggtttcactgccccttcatctattcaatgtcaagcttggcccatggctctt
tccggtcgagatctcgtcgctgttgccgagactggttccggtaaaacaatctcttttgcc
cttcccgccatggttcacatcaacgcccaacctctccttgctcccggtgatggtccagtc
gtcctcatcctcgctcctactcgagaacttgccgttcaaattcaagccgagtgtaccaga
ttcggcaaatcttctcgaatcagaaacaccgccatctacggtggagcacccaaaggtcct
caaatccgagatctccaaagaggtgtcgagatttgtgtcgctactcctggtcgattgatc
gatatgctcgaaagtggaaagactaacctcaaacgagtcacctacctcgtcatggatgaa
gccgatcgaatgcttgatatgggtttcgaacctcaaatcagaaaaattgtcagtcaaatc
cgacctgaccgacaaactctcctcttctctgctacttggcccaaagaagttcaacgtctt
gcaatggatttcctccacgatttcattcaagtcaacattggttcaatggaccttactgcc
aatcacaacgtagaacaacacgttgagatttgtaccgattacgataagagacaaaagctt
ctcggtcatcttgaagcaatctccaaggagaacggcaaagcaatcattttcgttggaaca
aaacgagttgccgatgatcttactaaattcctccgaatggatggctggcccgccttggcc
atccacggtgacaaacaacaagccgagcgagattgggtacttgcggaattcaaagccggc
cgaagccctatcatgcttgctactgacgttgcttcccgtggtctcgatgtcaaggacatt
gggtatgtcatcaactatgatttccctaataactgtgaagactatattcatcgaatcggt
cgtaccggtcgtgccggtcgaaagggtgtttcgtacacttacttcactcccgataactct
aagcaagctcgtgaactcgttaccattctgagagagtctaagagtgaagtatctcctgag
ctcgagcaaatggccatgtacggtggcggcggtggtggacgaggccgagggggtggtgga
cgaggaggaggaagaggtggatcacgatttggtggtggaggtggtggagggggctatggc
tccggttccaactcttacgggggtggcggcggtggtggtggcggtggctactcttctcga
tggtag
DBGET
integrated database retrieval system
