Kwoniella shivajii: 87958386
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Entry
87958386 CDS
T10982
Symbol
IL334_006256
Name
(RefSeq) uncharacterized protein
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ksh Kwoniella shivajii
Pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87958386 (IL334_006256)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87958386 (IL334_006256)
Spliceosome [BR:
ksh03041
]
Complex A
U2 snRNP components
U2 related factors
87958386 (IL334_006256)
Complex B
87958386 (IL334_006256)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
DUF8489
RRM_occluded
RRM_7
RBD_AKAP-17A
RRM_11
Motif
Other DBs
NCBI-GeneID:
87958386
NCBI-ProteinID:
XP_062794011
UniProt:
A0ABZ1D6P2
LinkDB
All DBs
Position
8:complement(join(1392150..1392314,1392454..1392830,1392943..1393393,1393456..1393724,1393799..1394446,1394539..1394595,1394665..1394680))
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AA seq
660 aa
AA seq
DB search
MDAGYDALEAAASSYAKNSGRDDDSRSHRSHRDKDYDRDREREKRHRDRGDRDDRSHRGG
DRDDNYRPERDSGRDRDRDGYRDRDRERDRYDRDNRGGYDERDRERDRPRRRRREDDDND
LAAQPMGGGAAGGGGHRDRRPRHEDPYAQPMRGYSPPPRRRRDEDDGFRGGGGGGGGGGG
GGGRDRDRDRSRDRRRRGSPGRSPTPPGTVPLEERHLQNSHWDIRPAQFEGVGAMEAKMT
GMFTYGPGRVPPPASLGVPSQLMAGSFPPANPVRQTKRLYVGGINDRMSEQQIQDFFIKL
MQEHKLAVDMPGEPVATCQINNEKNFAFVEFRTADEATAALQFDGVMYDGQPLRVRRPKD
YSGVDPLASTFGVPGGSMVDSPNKLFIGGLPTYLNDEQVLELLKAFGELKTFNLVKESAG
VSKGFAFCEYMDSTVTDMAIQGLHNFALGDRVLVVQRAAVGRNQGPAHAMPGSAAFLQQA
VPNILQSAHADAPPTRVMLLLNMVTPEELYSDEDYTEILEDINDECSKYGQVEGVRIPRP
TPKNKKWAPGDSAAASAEKSRAIDEENGVGRVYVMYKDVGSASKAMNAIGGRQFGGRTIL
VANVLEEEFLGPAPPPPPPPEGEAPAPEESGSPPPPPPPPPEDLDAAAADAVKDIMSGIL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggatacgacgctcttgaagcggctgcttcctcttatgccaaaaacagtggt
cgggatgacgattctcgaagtcaccgaagccaccgtgataaggattacgaccgagaccga
gagagggaaaagagacacagggatcgaggagatagggatgaccggagtcatcgaggagga
gacagggatgacaactatcgacctgaaagagacagcggaagagatagagacagggacggt
tacagagatagagatagggagagagacagatatgatcgtgataacagaggaggatacgat
gaaagagatagagaaagggatcgacctagaagaaggagaagagaggacgacgataatgat
ttagcggctcaacccatgggaggcggggctgcaggcggtggtggacatcgtgatagaaga
ccaagacatgaagatccatatgctcaacctatgagaggatatagtccaccacctagaaga
agaagagacgaagatgatggattcagaggaggtggcggtggtggtggtggtggtggtggt
ggtggtggaagagacagagatagggatagaagtagagataggagaagaaggggtagtcca
ggaagaagtcctactccacctggaacagttccattagaagagagacatcttcagaattct
cattgggatatcagaccagctcaattcgaaggtgttggcgctatggaagccaagatgact
ggaatgttcacttatggtcctggacgagtaccgcctcctgcctctttaggtgttccatct
caactcatggctggatctttccctcctgctaatccagttcgacaaaccaagagattatac
gttggaggtataaatgatagaatgtcagaacaacagattcaggacttcttcatcaagttg
atgcaagaacacaagttggcagtagatatgcctggtgaaccagtagcgacatgtcaaatt
aacaatgaaaagaactttgcttttgtcgagttccgaactgccgatgaagctacagcagca
ttgcagtttgacggagtgatgtatgatggacagccactgagagtaagaagacctaaagat
tattctggagtagatccattagcatcaacatttggtgtaccaggaggatcaatggttgat
tcacccaacaaattattcattggtggtttaccaacatacttaaatgacgaacaagtatta
gaattattaaaagcgtttggtgaattaaagacattcaatttggttaaagaaagtgcaggt
gtatcaaagggtttcgcattttgcgaatatatggattcaacagtgacggatatggccatt
caaggtttacataacttcgctttgggtgatagagttttagttgttcaaagagctgctgtg
ggtagaaatcaaggtcctgctcacgccatgcctggttccgctgcgttcctgcaacaagct
gtcccaaacatcctgcaatcagctcatgctgacgcaccacctacacgagtcatgttgtta
ctcaacatggtcacacccgaagagttgtactcagatgaagattataccgagattttggaa
gatatcaatgatgaatgttccaaatatggtcaagtcgaaggtgtaagaatacctagacca
acacctaaaaacaaaaaatgggcacctggagattcagctgctgcatcagcggaaaagagc
agggcaatagatgaagaaaatggtgtaggaagagtttacgtcatgtacaaagatgttgga
tccgcttcaaaagcaatgaatgccattggaggtagacaatttggtggaaggactatcttg
gtagccaatgtactagaggaagaattccttggacctgcacccccaccacctcctcctcca
gaaggcgaagctccagcgcctgaagaatcaggtagtccaccaccacccccacctcctcca
ccagaagacctagatgcggcagctgcagacgcagtgaaagacatcatgtctggtatatta
tga
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