KEGG   Kwoniella shivajii: 87958402
Entry
87958402          CDS       T10982                                 
Symbol
IL334_006272
Name
(RefSeq) uncharacterized protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
ksh  Kwoniella shivajii
Pathway
ksh03013  Nucleocytoplasmic transport
ksh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    87958402 (IL334_006272)
   03015 mRNA surveillance pathway
    87958402 (IL334_006272)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ksh03019]
    87958402 (IL334_006272)
Messenger RNA biogenesis [BR:ksh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     87958402 (IL334_006272)
   mRNA cycle factors
    P-body specific factors
     87958402 (IL334_006272)
SSDB
Motif
Pfam: MIF4G Upf2 PP2-like
Other DBs
NCBI-GeneID: 87958402
NCBI-ProteinID: XP_062794027
UniProt: A0ABZ1D5T9
LinkDB
Position
8:complement(join(1441093..1441136,1441198..1441339,1441415..1441723,1441783..1441865,1441922..1442009,1442064..1442129,1442210..1442367,1442468..1442759,1442827..1442976,1443045..1443125,1443187..1443369,1443433..1443501,1443568..1443678,1443736..1444506,1444570..1444803,1444877..1445140,1445213..1445412,1445508..1445598))
AA seq 1111 aa
MSSTSEYVAKLPRRKKLLATAETYWLEEARRPPGSLDSSLKKHTTLLNKLKTCLLVGPPE
TFIKEIDSLTLTKYLEEIVAAVVEGSTKKGDAEIAVDIIVHLHTRLTPDFFPLLLQPLIA
ILTSTGTSVIPASKDGEKDKDKEDKERLSRQRPVLRIIAELAMVGAWPEGAIKGASEVGK
VLKALMTGDTQYTNLPLISTFLKYFARAYLGPNPSSAKNGQVNGNQSDESVDELILPEVQ
KKMRDLFDSYFNSASKTLVKGQIKLLEQDKRNHEAYIKSGEIFEDRQQAYEKMIKAVERL
TTGVQTLADLLSLAMPTLPTAATLSKSGLQIIESASSFTVREDGPIAGGIWDDEEERRFY
EDLVDLKEVVPSGLLGIKEKRGAKAEDMNGNEVAVEEDIEKKLAEQKAEEEDLQRQLEQM
ELQPDTTENKSTLEAQDMSRTGSASTADERIAPEQHVEDEEPAAQDTIVTEEDGLSSGPA
ARLTALFAALPEANNREVVDKLAVEFAFLNSKAARKRLIKFIGEVPKQRTDLLPHYARFI
ATLEKYMPDIGAGVLDILDEELRYLQRKKLVRELDSVRLKNVRFYGELAKFKVAKPYTIL
HTLKVFLDDFKFNIENISNLLETCGRFLLRFQGTKETAKKMVEILRRKQGTSHLDQRHQV
MLENAFYMCNPPERVAREVITLSPTQSFIQHLLHDVLMKRTLDKVLKLMRKLHWEDAETY
EFILLSFTSPNDIKFGNIPYLAALVYDLQRYHPEFSITVVDQVMEDIRIGMEENIFKYNQ
RRIATVRYLGELYMYRVVGAGVIFETLWSFLSFGHAESFPVPGRESPIDAVDDFFRVRLA
CTLLDTCGACFDKGSQARKLDQYLVMLQLYISCKAELPMDVEFMLTDTLDALRPKMPHLK
TFQEAAAKVDELLALGTGEDNDSGSEDGSEEGDRALPEDMVESNEAETLPIPGEGVEGQD
DDEEDEDVVLIRSSEQEKHSEIDDEAQSDFDREFAKLLADTTDARRDQRKAAPPVFDTAV
PLIRKRQDDPQGQEGKMHFTLLSKKGNRQQIRSLDIPIDSTIAMNSRTYQAQSKAEQEQL
KRLVLQNERRLERAEVDDIGTRGIKLRYLPS
NT seq 3336 nt   +upstreamnt  +downstreamnt
atgtcatcgacctctgagtatgtcgcgaagcttcctaggaggaagaagcttttggcgacc
gcagagacgtattggttagaagaagccagacggccaccaggatcacttgactcctcgctg
aagaagcacactactcttctcaataaactcaaaacgtgtttattagtaggaccaccagaa
acgttcataaaggagatcgatagtttgacattgacgaaatatcttgaggagatcgttgct
gctgtggtagaaggatcgacaaagaaaggtgatgcagagatcgcagtcgatatcattgta
cacctccacactcgcttaacaccggacttctttcctctactactacaacctcttattgca
attctcacttcgacagggacgagtgtcattccagcaagtaaagatggagagaaagataaa
gacaaggaggacaaggaaaggttaagcaggcaaagacctgtattgaggataatagctgaa
ttagctatggttggcgcttggcctgaaggcgctatcaaaggcgcttcggaagttgggaaa
gtgttgaaagctcttatgaccggtgacacgcagtacacaaacctaccgctcatatcaact
ttccttaaatactttgctagagcatatctcggtcccaatccatcttcagctaaaaatggc
caggtcaacggaaatcagtcagatgaaagcgttgatgagcttattttgccagaggttcag
aagaaaatgagagatttgttcgatagttatttcaattcagctagcaaaactctggtcaaa
ggccaaatcaaattgctcgaacaagacaaacggaatcatgaggcatatatcaagtcagga
gaaatctttgaagatcgtcaacaagcatatgagaagatgatcaaggcggttgaacgtctc
accactggtgtacaaacactggcagacctgttgagtctcgctatgcccaccttgcctacc
gctgctaccctgtcgaaatcaggactgcagattatcgaaagtgcgagttcctttacagtg
agagaagacggacctatagcaggtggaatatgggatgatgaggaagaaaggagattctat
gaagatctagtggatctgaaagaagtggtaccgtctggattattaggtataaaagaaaag
cgaggggctaaagctgaagatatgaatggaaatgaagttgcagtcgaagaagacatagag
aagaaattggctgaacagaaagctgaagaggaggatttgcaacgacaactcgaacaaatg
gaattacaacctgatacaacagagaacaaatccactttggaagctcaagatatgtcaagg
acaggttctgcttccactgctgatgaacggatagcccctgaacaacacgtagaggatgaa
gaacccgcagcgcaggatacaatcgtaactgaagaagatggactatcatctggtcctgca
gctaggttgacagctcttttcgctgctttaccggaagcaaacaacagagaggtggtagac
aaattagcagtagagtttgctttcctgaattcaaaagctgccagaaagcgattgatcaag
ttcatcggggaagtacctaaacaaagaacagatttactccctcattacgctagattcata
gctactttggaaaagtatatgcctgatataggagctggtgtgttagatattctcgatgaa
gagttgagatatttgcagcgaaagaagctcgttagagaactggattcagtccggctcaaa
aatgtccgattctacggtgaattagcaaaattcaaggtagccaaaccatatactatcctt
cataccctcaaggttttcctcgatgacttcaaattcaatattgaaaacatatcaaatctg
ttagagacttgtggacgattccttctaaggttccagggaacgaaggagaccgccaaaaag
atggtcgaaatattgaggaggaaacaaggtacttcccatctcgatcaaaggcatcaagtg
atgttggagaatgctttctacatgtgtaatcctcctgaaagagttgctcgagaagttatc
acgttgtctcccactcagagttttatacaacatcttttacacgatgtcttgatgaaaagg
actctggacaaagtcttgaagttgatgagaaaacttcactgggaagatgccgagacgtac
gagttcatccttctctcattcacatctccaaatgacatcaaatttggcaatataccttat
ctcgccgcgttggtgtacgacttgcaaagatatcatcccgaattctctattacagtagtg
gatcaggtgatggaagatatcagaataggcatggaagaaaacatattcaagtataaccaa
agaaggatagcaacggtcagatatttgggagaattgtatatgtacagggttgtaggagca
ggagtcatcttcgaaaccctatggagcttcctctcttttggtcatgccgaatctttcccg
gtaccaggcagagaatctcctatagatgcagtagacgacttcttccgtgtgagattggca
tgtacattacttgatacatgtggtgcatgtttcgataaaggttctcaagctaggaaattg
gaccaatacctggtcatgctccagctttacatctcttgtaaagcggagcttccgatggac
gtcgaattcatgcttaccgatactttggatgctcttcgaccgaaaatgccgcatctgaaa
acgttccaagaagctgccgcgaaggttgatgaattgcttgcactgggcacaggcgaagat
aacgacagcggttccgaagatggaagtgaagaaggtgatcgagcccttccagaagatatg
gttgaatcgaatgaagcagagacgctacctataccaggagagggagttgaagggcaagat
gacgatgaagaagatgaggatgtggttcttattcgatcttcagaacaagagaaacattcc
gaaatcgatgatgaagctcagtctgatttcgaccgtgaattcgccaaactattagctgat
accactgatgcgcgaagagatcaaaggaaagctgccccgccagtatttgatacggctgtt
ccgttgataagaaaaaggcaagatgatcctcaaggtcaagaagggaaaatgcactttact
ttattaagtaagaaggggaacagacaacagatccgttcactggacattcctatcgattct
acgatagcaatgaattcaagaacttatcaagctcaatcaaaggctgaacaagaacaattg
aaacgattggtactacaaaatgaaagaagacttgagcgagccgaagttgatgacatcgga
acaagaggaatcaaattacgatatctgccttcatga

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