Kwoniella shivajii: 87958606
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Entry
87958606 CDS
T10982
Symbol
IL334_006476
Name
(RefSeq) uncharacterized protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ksh03009
]
87958606 (IL334_006476)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
90S particles
Other 90S particles
87958606 (IL334_006476)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_PDCD11
OB_RRP5_4th
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Spt6_S1
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
TPR_19
DUF8501
HAT_Syf1_M
TPR_17
SesA
Ribosomal_L17
hGDE_central
Motif
Other DBs
NCBI-GeneID:
87958606
NCBI-ProteinID:
XP_062794229
UniProt:
A0ABZ1D625
LinkDB
All DBs
Position
9:join(399064..399318,399379..399487,399552..400115,400188..400480,400542..400772,400836..401030,401096..401448,401508..402387,402441..402502,402567..402696,402755..402823,402890..403837,403908..404061,404138..404354,404442..404586)
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AA seq
1534 aa
AA seq
DB search
MAIQNNKRFPQDAESSQPKKPRTGGEGSSTSVPASTPRPAPTFTSALKEEETDFPRGGGS
SLTPLELKQTRAEGRREAEEEAKAEAASQGNQRKKNMSERQIKRLKKNEVRTKSKTDEDT
IRVEILNYKRLVPGTHVLARVHTILPLHLILSLPNNLLAHVPITEISTTLTNLLTAEEAM
SVDSNKEEEDEEEGSDSDSSAPDLSQLFYPGQYFPAKVVNLYPTASQSFVSQYPMTETTR
LAARVEVTLVPEKVANEVSKKDIEKGYFLVGEVKSEEDKGYTVGIGSNPDEGSALDGWIS
KEEVEKHVPSKSLIPGQLLPATVSSLTAGGRVVQLSLDPLELTRSTISEVSTVGSLTPGH
LITALITAVVPSGLNVKVGGFYDGTIDLAHLPLGDDDIEEKYKIGKKVRARVIYDNLATT
PATFALSALPHVVGLTSPKKEGEDVPLEHAITIGKMYQSVKVVRVIPDWGVLCRTSDGLD
GFCHISHLSDERVSILSTGTGQYKAGTLHRARVIGHSPLDGVLLLSFEQKVLDQTFMQVG
ELKIGQVLKGTVHRLSERMLFISLSGSVDGIVFPTHYADIKLKHPEKRFKVGSNVRARVF
AIEEARNRVVLTLKKTLVESTDAIPQGFGDVKIGQVTPGVIVKIMEKGCIVDLFGSIKTF
MPLSESSPTFVKNLNDLFYVGKSVTVRVLDVQPENERIVVSAKQASPNAITTAAEKLQVG
DAVSGTVSAIHEEQVVVKLNESGLTSLLSLSNLSNQRHMGIDELRSTLKTGDTIDDLVVV
SKNPVSGLIIVNIKKVNTAPTKTKTKKEKKEEVASGISRNVKAIDEIQIGQILTGTVIEH
TERGTMVQLPNRLRGRIHPLDAVDDLSSLVDGHGPFAVDQEIKVYVLGINKQKKAIDLSS
RPSRTTPGSQVQDKELVNVKGLKEGQSVRGLVKNIASHGVFVSLGREVTARVMIKELFDE
FVKDWESRFEVNQLVIGKIISADEKKNSVEMTFRKFPAKSTKKEVKLGLSDFEEGQKVVA
EVKKVEAYGIFLRIEGSDVSGLCHKSEISDNKKQDVSQALKSFREGDQVKAKILSIDQEK
RKINFGIKASYFGEEFGEAQDEDEDEDEEMDGEAEAEEEDQEEDEDEDEDDENVIMMGSD
DDEDVEDDDDQEEEEEEEDEEDEEEEVDEDEQSEESDGEVTEAPIPTPSAKKSVNSTSTS
GLAVAGGFDWTGEASKSDDSSSESDSDEETEVPAISAKSKGKSKLEDLTSTAPDARPESS
SEFERALLASPNSSYLWIQFMSFHLQLHEIEKARKIGRSALETINYREEEEKLNVWMALV
NLELSFGTLDTTDKIFKEAAQYNDARSVHIRYAEALQASGKDELVEEIFKKIVKKFSQYP
DSWTRFAEFYLKKGDAESARSLLPRAMKSLDKPKHVETIEKMSLLEFKYGDHERGKTLFE
GLVDRFPKRLDLWGVYIDQLAKIDDIQGVRGLVDRALNQKLTSKKAKFLFKKLLTIEQRI
GDEKGQEKAKERAKAWVMENTKTEEEGESDEEEE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccaaaacaacaagcgatttccgcaggatgctgagtcatctcaacccaaaaaa
ccaaggacgggcggtgagggaagttcaacctcagtccctgcttcaacaccgagacctgct
cctacgtttacgtctgcgttgaaagaggaagaaactgatttccctcgtggaggaggatct
agtttgactccattggaactcaagcagaccagagccgaaggaaggagagaagctgaagaa
gaagcgaaagcagaggccgcttctcaaggtaatcagcggaaaaagaacatgagtgagagg
cagatcaaaagattgaagaagaatgaagtgagaacgaaatccaagactgatgaggataca
atccgagtcgagatcttgaattacaaaagacttgtgccgggtactcatgttctcgctcga
gtacatactatccttccacttcatctcatcttatcccttcccaacaacttactcgcccac
gtgcccatcaccgaaatctctaccacacttaccaaccttctcacagcggaagaagccatg
tctgtagattcaaataaagaagaagaggacgaggaggagggatcggattcagattcttcc
gcacctgatttatcacagcttttctacccaggccaatacttcccagctaaagtagtcaac
ttatatcctactgcaagtcaatctttcgtatctcaatatccaatgaccgaaactacaaga
ttagcagctagagttgaagttactctcgtgcccgagaaagtagcaaatgaagtatctaaa
aaagatatagaaaaaggttatttcttagttggagaagtcaagagtgaagaagataaaggt
tatactgttggtatcggttcgaatccagacgaaggatctgcgctggatggttggatcagt
aaagaagaggtcgaaaagcatgtaccttccaaatcactgatacccggtcaacttctacct
gcgactgtatcttctctcactgccggaggaagggttgttcaactttctctcgatcccctc
gagctcactcgaagtacaataagcgaagtttcaacagttggctcgttaactcccggtcat
ctgataacggctcttattaccgctgtcgtaccttcaggattaaatgtgaaggtcggtgga
ttctacgatggtactatagatctagcgcatttgccattaggagatgacgatatagaggag
aagtacaagattggtaaaaaggttcgtgctagagtgatatacgataaccttgctaccaca
ccggcaacattcgctctttctgctcttccccacgttgtcggtttgacaagtcccaaaaag
gagggcgaggacgtaccattggaacatgctatcactatcggcaagatgtatcagagcgtg
aaagtagtcagagtcattccggactggggtgtactctgtagaacaagtgatggtttggat
gggttctgtcatatcagtcacctttccgatgaacgtgtatccatactatcaaccggtacc
ggtcaatacaaagctggtacactccatagagcaagagtgataggacactcaccattggat
ggtgtgctattactctctttcgaacaaaaggtccttgaccagactttcatgcaagttggc
gaactcaagataggtcaagtgctcaagggtactgttcaccgactatctgaaagaatgctt
ttcatatccctgtccggttcagtagatggtattgtcttcccaacccattacgccgatatc
aaactcaaacatcccgagaagagattcaaagtaggatcgaatgttagggctcgtgttttc
gccatagaagaagctcgaaatagagtagtgttgacgctgaaaaagactttggtagagtcg
acagatgctataccccaaggatttggagatgtcaaaattggtcaagtcacacctggtgtc
atcgtcaagatcatggagaaaggatgcatcgttgatttattcggaagcatcaagaccttt
atgcctctatcagagtcaagtccaactttcgtcaaaaacctcaatgacctattctacgtc
ggtaaatcagtcacagtgcgggtacttgatgtccagcccgaaaacgaacgaatcgtagta
tcagccaaacaagcttcgcctaatgctataacgactgcagctgaaaaattacaagtaggc
gacgcagtttcaggaactgtctcggcaattcacgaagaacaggtcgtcgtcaagctcaac
gaatcaggccttacctcgttattatctttgagtaacttatcaaatcaacgacacatggga
attgacgaattacgatctacattgaagacaggtgatacgattgatgatttagttgtggtt
tctaagaaccctgtttcaggattgattattgtcaacatcaaaaaagttaatactgctccc
accaagacaaagactaagaaagagaagaaggaagaagtcgcttcaggaatttcaaggaat
gttaaagctattgatgaaattcaaattggacaaatcctcactggaactgtcattgaacac
actgaaagagggacaatggttcagttaccgaatcgactacgaggtagaatacatcctctc
gatgctgtagatgacctttcatcacttgtagacggtcacggaccttttgctgtcgatcaa
gagatcaaggtttacgtgttaggaatcaataagcaaaagaaagctatagacctttcttca
agaccttctcgaactactcctggaagtcaagttcaagataaggaacttgtcaatgtaaaa
ggtctcaaagaaggtcaaagtgtaagagggttagtgaaaaacatagctagtcatggtgtc
ttcgtcagtcttggaagagaagttactgccagagtaatgatcaaagagttattcgatgag
ttcgttaaagattgggaatctcgtttcgaggtaaaccagctcgtcattggtaaaatcatc
agtgccgacgagaagaagaactctgtcgaaatgactttccgtaaattccctgctaaatcg
accaaaaaagaagtcaagttaggtctgagcgatttcgaagaaggtcaaaaagtcgtcgca
gaagtcaagaaggtcgaagcctatggtatcttcttgagaatagaagggagtgacgtctct
ggattatgtcataaatcagagatatccgataacaagaaacaagatgtttctcaagctctg
aaatcattcagagaaggtgatcaagtcaaagctaaaatcttgagcatcgatcaagagaag
aggaaaatcaacttcggtataaaagctagttactttggcgaagagttcggtgaagctcaa
gatgaagatgaagatgaggatgaagagatggatggtgaagctgaagctgaagaggaggat
caggaagaagatgaagatgaggatgaggatgatgagaatgttatcatgatgggcagtgat
gacgatgaagacgtcgaagatgacgacgatcaagaagaagaagaagaagaggaagatgag
gaagatgaggaggaggaagtcgacgaagatgagcaaagtgaagaaagcgatggcgaagtt
accgaagctccaatcccaacaccctctgccaaaaagtcagtcaactctacttcaacttcc
ggtctcgctgtagcaggaggatttgattggactggagaagcctctaaatccgatgactca
tcatccgaatccgactctgatgaagagactgaagttccagcaatatcagccaaatcaaaa
gggaaatcaaaacttgaagatctaacgtctaccgcacctgacgctcgacctgaatcgtca
tcagaattcgaacgtgctttattagcttcacctaattcttcctacctatggatacaattc
atgtcattccacttgcagttacatgaaattgagaaagctagaaaaataggtagatcagct
ttggagacaatcaattatcgtgaagaggaagagaaattaaatgtctggatggctttggtc
aatcttgaactgagttttggtacacttgatacaacagataaaatattcaaagaggctgct
caatataatgatgctagatcagttcatataagatatgctgaagctttacaagcttctggt
aaagatgagctcgtcgaagagatcttcaagaagatagtcaaaaagttctctcaatatccg
gattcttggactagattcgctgaattttacctcaagaaaggagatgcagaatctgctaga
tcattattacccagagcgatgaaatctcttgataaaccaaaacacgtcgagacaatcgag
aagatgtcactattggaattcaaatatggtgatcacgagagaggcaaaacgctgtttgaa
ggattagtagatcgtttccccaagagattagatttatggggagtatacattgatcaacta
gccaaaattgatgatatacaaggtgtaagaggattagtggacagagccttaaatcaaaag
ttgacaagtaaaaaagcaaaattcttgtttaaaaagcttttgactattgaacagagaata
ggtgatgagaaaggccaagagaaagcaaaggaaagagctaaagcatgggtcatggaaaat
accaagacggaagaagagggagagagcgatgaggaagaggagtag
DBGET
integrated database retrieval system
