KEGG   Kwoniella shivajii: 87958845
Entry
87958845          CDS       T10982                                 
Symbol
IL334_006715
Name
(RefSeq) uncharacterized protein
  KO
K12878  THO complex subunit 1
Organism
ksh  Kwoniella shivajii
Pathway
ksh03013  Nucleocytoplasmic transport
ksh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87958845 (IL334_006715)
  09122 Translation
   03013 Nucleocytoplasmic transport
    87958845 (IL334_006715)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ksh03019]
    87958845 (IL334_006715)
   03041 Spliceosome [BR:ksh03041]
    87958845 (IL334_006715)
Messenger RNA biogenesis [BR:ksh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     87958845 (IL334_006715)
Spliceosome [BR:ksh03041]
 Complex C
  Other components
   EJC/TREX
    87958845 (IL334_006715)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    87958845 (IL334_006715)
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 87958845
NCBI-ProteinID: XP_062794464
UniProt: A0ABZ1D8P4
LinkDB
Position
9:complement(join(1037413..1037460,1037515..1037961,1038027..1038141,1038199..1038401,1038490..1038747,1038809..1039483,1039544..1039671,1039741..1039858,1039920..1040168))
AA seq 746 aa
MASRLYPSLKTAIASVVSSYSPAREPVQPILSSELKERLSEIWSESSVGLNASESSSKSG
DVVRTVLEVIGRDVVVLPITSGELAEADIEGSKEDKQIFQTSLQDRLDVVLTLFEVVYAA
YPDLPALEPGALFIPLLEELVELISVDSWRELWTYVETRSKRFTKDMPASRGKALPLLRT
INAFLRFLPRTPENLVFRGRVHQFASSVISVADKSAINMRGDYAEVRTTWDEEEIKGIED
QEQEEVQDGEGDVKMDMDDNDEKKIEVEAGTSSEQDLPSNNSVSHYLSIATAPQMDFYPT
LWSLQQYFAHPPSLDGIATGEPPKTPFDTFKEKSDFVLPQLFAQTQKEKALLGKDTEIGG
KKRKRSAEDEGNGGFFHPRFLTGKRLLEHELADPSFRRQILVQYFILFQFLLNLTPASAG
KQAFTGGMPKTFVLGTDDEKWVISKIQIIRDELTKMEDGKRFEETVLSIITREVHYAQWK
NDQCPEGVFEIPPLEDKTAKDAAKAWEKRLAPPASYTFKVGSRPLSMLWNNGFRGIDQLK
GREKATSEEQLDEEIQKIVIDEEDDKAMGREQPQEEMAANKDRKTSLTWRGLRLASHHHL
RYFGVLAPKRDIHVLLKATRGETDSKGPAVENQVEAEKNDDDNGQEVEVAGDEDGKDEPS
GEDSAMETIAEQPAPQDTVKTEDTARDVDMNELPKPGTEDVAAIDTIEDVKQPSRRLESD
QANLAVVNEIEANGTEPEAPNPPTSM
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcgtccaggctctacccatcgctcaaaacagccattgcttctgttgtcagctcttac
tcccctgccagagaaccggtacaacccatactttcttccgaactcaaagaacgactgagc
gaaatatggtccgaatcttcagtcggtctcaacgcatctgagagttcctcaaaatctgga
gatgtagtcagaacggtgttagaagtgattggtagagatgttgtggttttacccatcacg
agcggagaacttgccgaggctgacatcgaagggtcaaaagaagacaaacaaatattccaa
actagcctacaagatagactagacgttgtcttgactctctttgaggtggtatatgctgct
tacccagacctaccagcacttgaacctggagctctgttcatccctctcctggaagagcta
gtagaattgatttcggtagactcgtggcgtgagttgtggacttacgtggagacgaggtct
aagcgattcacaaaggacatgcccgcatctcgaggcaaagctctacctctccttcgtacc
atcaatgcctttcttcggttcttaccccgtacgcctgagaatcttgtattccgaggtaga
gtgcatcaatttgcgagttcggtgatcagcgtagcagataaaagtgcaatcaatatgcgt
ggggattatgcggaagtcaggactacgtgggatgaagaagagatcaagggaatagaggat
caagagcaggaagaggtccaagatggagaaggagatgtgaaaatggacatggatgacaat
gacgagaagaagattgaggttgaagctggaacatcgagcgagcaagatctgccgtcaaat
aattctgtctcacattatctttcgatagcaacagcacctcagatggatttctacccaacg
ttatggtcccttcagcaatattttgcgcacccgccatcactggacggcattgcaactggt
gaaccgcccaagacacccttcgacacgtttaaagaaaagtctgatttcgtgcttcctcaa
ctgtttgcgcagacgcaaaaggagaaagctctacttgggaaagataccgagattggaggt
aagaagcgaaagcgatcagcggaggacgaagggaacggaggatttttccaccctcgattt
cttacagggaaacgattattggaacatgagctcgctgatccatctttccgccgccaaatt
ctggtccagtattttattctcttccaatttctcctcaatttgactccagcttctgccggc
aaacaagctttcactggtggtatgcccaagacctttgtactgggtacagacgatgaaaaa
tgggtcatatcaaagattcagataataagggatgaattgacaaaaatggaggacggaaaa
aggtttgaggagactgtgttatcaataataacaagagaagtacactatgctcaatggaag
aatgatcaatgccctgaaggagtcttcgaaattcctcctcttgaagacaaaacggcgaaa
gatgccgcgaaagcatgggagaaaagactagctcctcccgcatcatacacattcaaagtg
ggttccagaccactgtcgatgttatggaacaacggtttcagaggtatcgatcagcttaaa
ggaagagaaaaagctacaagtgaagaacaactggatgaagagatccagaaaattgtgatt
gacgaggaggacgataaagcgatgggtagagaacaacctcaagaggagatggcagcgaat
aaagaccgcaaaactagtcttacatggcgtggccttcgattggcttcccatcatcatttg
cgctacttcggtgttctcgctccaaaaagagatattcatgtgcttctgaaagccacacga
ggggagacggactcgaaagggcctgcagtagagaaccaagtggaggccgaaaagaatgat
gacgataatggtcaggaggtagaagttgctggtgatgaggatggcaaggacgaaccaagt
ggcgaagacagtgccatggaaacgattgccgaacagcccgctccacaagacacagtgaaa
acagaggacacggcaagggacgtagatatgaatgaacttcccaagccagggacggaggat
gtcgcagccattgatacaatcgaagacgtcaaacaaccaagcaggagattagagtcagac
caggcaaacttagcggtggttaacgagatcgaggcgaatggaactgaaccagaagctcct
aatcctccgaccagcatgtaa

DBGET integrated database retrieval system