Kwoniella shivajii: 87959156
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Entry
87959156 CDS
T10982
Symbol
IL334_007026
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
ksh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87959156 (IL334_007026)
03015 mRNA surveillance pathway
87959156 (IL334_007026)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87959156 (IL334_007026)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87959156 (IL334_007026)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
87959156 (IL334_007026)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF733
PAM2
Motif
Other DBs
NCBI-GeneID:
87959156
NCBI-ProteinID:
XP_062794772
UniProt:
A0ABZ1D8C0
LinkDB
All DBs
Position
10:complement(join(369310..369342,369436..369590,369774..370041,370124..370361,370462..370751,370852..370954,371010..371102,371167..371240,371331..371446,371575..371913,372126..372306))
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AA seq
629 aa
AA seq
DB search
MSESNNNTVTTSSSWADLDDEEDGKVEFKGLNPSANSFNPSSTSSSSSFKPTSTSANQQE
KDDAPVASLLSRISGLTTNPTPTPESNPPASGPTEPSSSSSSVSSTRPKPNTSSALFGKA
LAGVKSDRPSHPSPPPAPASTATTAPSSAKTPVELINNDSDKKESKMSGFNDGGWEGNTQ
GANGNGHEDKKDALTDASMSEGGLISNDFQVEVKLADLQADPDSALYSAKTFEALNLHED
LMKGIYSVGFKKPSKIQEKALPLLLSNPPQNLIGQSQSGTGKTAAFTLNMLSRVDPGLLT
PQAICLAPSRELARQIQEVVDKIGQFTQITTHLAVPKSWARGKRIDKHILIGTPGTLVDM
LSMGKRIFDPAQIRVFVLDEADEMIALQGLGDQTVRIKKMLPAGVQNVLFSATFTEEVQH
FAQSFAPEANQLFLKKGEVTVDAIKQLYLECDGEESKYDALSALYDCMSIGQSIVFCKTK
ATADGIADRLTKEGHQVASLHGDKMSNERDDILDGFRNAKTKVLITTNVVARGIDIQQVN
MVVNYDVPELNRDQDYRPDIETYIHRIGRTGRFGRKGCSVIFVHDDKSRDDVNYIMEQLG
KPMQKINARSEKDLDQLEKALKAAMKGPN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatccaataacaacactgtcaccactagcagctcgtgggctgatctggacgat
gaagaagatggtaaagtggaattcaaaggattaaatccatcagcaaattcattcaaccct
tcttctacatcctcttcatcatccttcaagccaacttccacttctgcgaatcaacaagaa
aaggacgacgcacctgtcgcatctttgttgtctcgaatatcaggattaacaaccaaccct
actcccactcctgaatcgaaccctcctgcttcaggtccaacagaaccttcttcttcatca
tcttcagtatcgtctacaagaccgaaaccaaacacgtcaagtgcattatttggtaaagct
ctagctggagtaaaatcggatcgtccgtctcatccttcacctccacctgcccctgcatca
actgctacgacggctccaagtagtgctaaaaccccagtcgaacttataaataacgactcg
gataagaaggaaagcaagatgagcggattcaatgatggtggatgggaaggcaatactcaa
ggtgcaaacggaaatggtcatgaggataagaaagatgctttgactgatgcaagcatgtca
gaaggtggattgatctcgaacgatttccaagttgaagtaaaattggcagatttgcaagcc
gatcctgattccgctttgtattctgctaaaacttttgaagctcttaatcttcacgaagat
ttgatgaaaggaatctactctgttggattcaagaaaccttccaaaatccaagaaaaggct
ttaccattattgctttccaatcccccccaaaatcttattggtcaaagtcagtcaggtact
ggtaaaaccgcagctttcactcttaatatgctcagtagagtcgatcctggtttgcttact
cctcaagcgatctgtttggcaccttcccgagaactcgctcgtcagattcaagaggtggta
gataaaatcggccaattcacacaaatcacgactcatttggcagtgcctaaatcttgggca
aggggtaaacgaatcgacaaacatatcttgatcggtacaccgggtactttggttgacatg
ttatccatgggcaaaaggatcttcgatccagcacagatcagagtattcgtcctcgatgaa
gcggatgagatgattgctcttcaaggcttgggagaccaaactgtaagaatcaagaagatg
cttcctgccggagtgcagaacgtcttattctcagccacgtttaccgaagaggttcaacac
ttcgctcaatcattcgcccccgaagcaaatcagcttttcctcaaaaaaggagaagtcacc
gttgatgcgatcaaacaactttacttggaatgtgatggagaagagtcgaaatatgatgct
ttatccgctctatacgactgtatgagtattgggcagagtatagtattctgtaaaacgaaa
gccacagccgatggaattgcggacagacttacaaaggaaggacatcaagtagcatcccta
catggtgataagatgtccaacgaacgtgatgacattttagatggattcagaaatgccaaa
acaaaggttctgatcactaccaatgtagtagctagagggatagatatacaacaagtaaat
atggtcgtcaattatgatgtccctgaattgaacagagatcaagattatagacctgatatt
gagacttatatacatcgaattggtcggaccggtcgatttggtcgaaaaggatgttcagtg
atcttcgttcacgatgacaaatcaagggatgacgtgaattacatcatggaacagttgggt
aaaccaatgcagaagatcaacgctagaagtgagaaagatttggaccagttggaaaaggca
ctcaaggctgccatgaaaggacccaattag
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