Kwoniella shivajii: 87959228
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Entry
87959228 CDS
T10982
Symbol
IL334_007098
Name
(RefSeq) uncharacterized protein
KO
K12828
splicing factor 3B subunit 1
Organism
ksh Kwoniella shivajii
Pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87959228 (IL334_007098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87959228 (IL334_007098)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87959228 (IL334_007098)
Spliceosome [BR:
ksh03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
87959228 (IL334_007098)
Complex B
87959228 (IL334_007098)
Complex C
U2 SnRNP specific factors
87959228 (IL334_007098)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
87959228 (IL334_007098)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_ECM29
HEAT
mTOR_dom
MMS19_C
Motif
Other DBs
NCBI-GeneID:
87959228
NCBI-ProteinID:
XP_062794843
LinkDB
All DBs
Position
10:complement(join(558740..558821,558873..561328))
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AA seq
845 aa
AA seq
DB search
MSDEPYRPALQTYTAPQDILDEHAELADQDDTPDVFEDNAKSKQVAARQSDYHLRRFDRA
DGQGEGEDESYEDRMRRVNLQREEERVRRHKEQLEKDKEQDEKMILDDKTPPRAIAGGDT
PPRAAAGGDTPPRDSTPPKKKRRWDVEEVKEEPGVTKRKSRWDQTPSEAVPEVKRSRWDQ
TPGASSTTSALTSAPPVGGVMMVEDKRYRRMTDEELDGLLPGGEEGYELVPVPDDYKPAP
SVRKMVPAQTEHGFMMQDDSDAIKARSAAGGMQGSTEQTEIEGIGTLQFLKPEDTQYFAK
VLGEGGGEEDDSAYTLEELKERKIMRLLLKIKNGTPPVRKTALRQITDRAREFGAGPLFD
KILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG
REIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSVVASALGIPALLPFLRAVCR
SKKSWQARHTGIRIIQQIAIMMGCAVLPHLRNLVDTVADGLQDEQQKVRTMTALSLAALA
ESAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYIIPLMDPEYAGYYVRECMPIL
IREFQTSDEEMRRIVLQVIKQCASTEGVTPTYIKEEVLPEFFKAFWVRRMALDKRNYKQL
VETTVELAQKAGVSEIVGRVCNDLKDESEPYRKMVMETVTKVVAGIGAADIDERLEVLLI
DGIIFAFQEQTLEDTIMLDGFATVVNALGGRVKPYLPQIVSMILWRLTNKSAKVRMLAAD
LTTRLAPIIKSSGEDNLLSKLGVVIFEQLGEEYPDALGSLIAAEGAIANVVGMTQMNPPV
KDLCE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgagccatatcggccagctcttcagacgtacactgcgccgcaggatatcctt
gacgaacatgcagagttagcagatcaagatgacactccagatgtgttcgaggacaacgca
aagtcaaagcaagttgccgctcgtcaaagcgattatcaccttcgacgtttcgaccgagca
gatgggcagggagaaggagaagacgagagttacgaggataggatgagaagggtgaacctc
caacgcgaggaagaaagagtgagaagacataaagagcaattagagaaggataaggaacag
gatgagaagatgatattggacgacaagactcctccacgagcgatcgcaggaggtgatacg
ccaccaagagcggctgctggaggagacacacctccacgcgactctacaccaccgaagaag
aagaggaggtgggatgtggaagaagtcaaggaggaacctggagtaaccaaacgtaaatct
cggtgggatcagacaccttctgaagcagtgcctgaagtgaaacgatcacgttgggatcag
acacctggagcatcatcaacaacttctgcccttacttctgctccacctgtcggcggtgtt
atgatggttgaagacaagcgatatcgacgaatgacagatgaagaattggatgggttattg
ccaggaggcgaagaaggttacgaacttgtaccggtaccagatgattacaaacctgctcct
tcagtcagaaagatggtccctgcccaaacggaacatggcttcatgatgcaagatgattct
gatgctatcaaagctcgttctgcagctggtggtatgcaaggatccaccgagcaaacagaa
atcgaagggatcggaacacttcagttcttgaagcctgaagatacacaatattttgcaaag
gtgcttggagaggggggaggcgaggaggacgattctgcgtatactttggaagagctcaag
gagaggaagatcatgcggttattgctcaagatcaagaacggtacacctcctgtcagaaag
actgctctacgtcagatcaccgatcgagcgagagagttcggtgctggtccattgttcgat
aaaatcctccctttgctaatggaacgcactcttgaagatcaggaacgacatttacttgtc
aaagttattgatcgagtgctgtataaacttgatgatctcgttcgaccatacgttcacaag
atccttgttgtcatcgaaccactcctcattgacgaagactactacgctcgagtagaaggt
agagaaatcatatcaaacttggctaaagctgctggtctcgctcatatgatatcaaccatg
cgacctgatatcgatcacgttgatgagtacgtgagaaacactactgctcgagcgttttct
gttgttgcctctgcccttggtatccctgccctcctccccttccttcgagctgtatgtcga
tcgaagaaatcttggcaagcgcgtcatactggtatccggatcattcagcaaattgccatt
atgatgggatgtgccgttcttccacatctgcgaaatctcgttgacacggttgccgatggt
ctccaggacgagcaacaaaaggtccgaaccatgactgccctctccctcgctgctcttgcc
gaatccgctgccccctatggtatcgaatctttcgacaacgttttgaaacctttatggctg
ggcatccgacaacatcgaggcaaaaccttggcagcctttctcaaagctatcggttacatc
attccattgatggatccagagtacgctggatactatgttcgggaatgtatgcctatcctc
attcgagagttccaaacgtcggatgaagaaatgagacgtatcgtcttgcaagtcatcaaa
caatgtgcctctactgagggagtcactcctacttatatcaaagaagaggtgcttccggaa
ttcttcaaggcgttctgggtgagacgtatggctcttgacaaacgaaactataagcaattg
gtggagacaactgtagaacttgcgcagaaggcgggcgtttctgaaattgtcggcagagtg
tgtaacgatcttaaggacgagtctgagccataccgaaagatggtaatggagaccgttacc
aaggtagtagccggcataggtgctgcggatatagatgagagactagaagtgcttcttatt
gatggtatcatcttcgcattccaagagcaaacgctagaagacactattatgctggacggt
tttgctacagtcgtcaatgcacttggtggccgagtcaagccatacctccctcaaatcgtc
tccatgatcctctggcgattgaccaataaatcggcaaaagtccgtatgcttgcagccgac
ctcactactcgactcgctccgatcatcaagagttccggtgaagataacctacttagcaaa
ttaggtgtagtcattttcgaacagcttggtgaagagtatcctgacgctctaggaagtctc
atcgctgccgaaggagctatcgcaaatgtggtgggtatgactcaaatgaacccacctgtc
aaggatttatgtgagtga
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