Kwoniella shivajii: 87959282
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Entry
87959282 CDS
T10982
Symbol
IL334_007152
Name
(RefSeq) uncharacterized protein
KO
K13174
THO complex subunit 5
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87959282 (IL334_007152)
09122 Translation
03013 Nucleocytoplasmic transport
87959282 (IL334_007152)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87959282 (IL334_007152)
03041 Spliceosome [BR:
ksh03041
]
87959282 (IL334_007152)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
87959282 (IL334_007152)
Spliceosome [BR:
ksh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
87959282 (IL334_007152)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Phage_tail_terminator_6
DUF2027
Med21
Motif
Other DBs
NCBI-GeneID:
87959282
NCBI-ProteinID:
XP_062794897
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All DBs
Position
10:complement(join(713995..714114,714180..714294,714456..714531,714604..714683,714775..715115))
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AA seq
243 aa
AA seq
DB search
MVLPKTICPPSPLDPLLLLPIPTTLPSSPIGDLDPLLSSLQSHLDSSSDSHIPITALTST
IRQITRKSQILLNAARAGAAQARDELDKVDEELRGVEYERARVGDEILRCSEYAPAYEEM
DLPSPEDFLAQADESVLKTLPSKDSEDYEHELTIARLEQELKEIEKREVQVAQLTKDRDI
LIRTKKEIKLRFDAVDIHLGGFARSANAVASKLKDVAELPTSAPVIAGSPLSVSQELATS
TST
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaccaaaaacgatttgtcctccgtcacctcttgatcccctcttacttcttccc
attcccaccacactcccttcgtctcctataggagatcttgatcccctcctatcgtcatta
caatcccaccttgattcctcttcagactcgcacatacccattacggcactcacctcaacc
ataaggcaaatcacaaggaagtcacagatacttttaaatgcagctagagctggtgcagca
caagctagagatgagctagataaggtagatgaggaattaagaggtgtggagtacgaaaga
gcaagagtcggtgacgagattctgagatgtagtgaatatgcacctgcatacgaagaaatg
gatttaccttccccggaggacttcttggcacaagctgatgagtctgttctaaaaactcta
ccgtcaaaagacagtgaagattacgagcatgaattgactatagctagactcgaacaagaa
ttgaaagagattgaaaagcgagaagttcaggttgctcaattaaccaaggatcgagatata
ctgattagaaccaagaaagagatcaagctgagatttgatgctgttgatatacatctaggt
ggattcgcaaggtccgccaatgcagttgctagtaaactcaaagatgtcgctgagctccca
acgtctgcgccagtaatcgctggatcaccattatcggtttctcaggagctggcaacttcc
acttccacatag
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