Kwoniella shivajii: 87959373
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Entry
87959373 CDS
T10982
Symbol
IL334_007243
Name
(RefSeq) exodeoxyribonuclease III
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87959373 (IL334_007243)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
87959373 (IL334_007243)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
87959373 (IL334_007243)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
87959373
NCBI-ProteinID:
XP_062794987
LinkDB
All DBs
Position
10:join(954692..954715,954781..954812,954873..954946,955053..955389,955509..955847,955921..957104,957206..957257,957336..957413,957490..957550)
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AA seq
726 aa
AA seq
DB search
MRILTWNVNVLRTCLDYHPFSSMKKKNVEGLLDELGAQIYCFQEHKTVRSKLEKSMAVPG
PYDGFWTFPRSKTGYSGVCTYVDSRYCVPLKAEEGITGLLLEDKSSTMKPPWKEEEKIGG
YPEDIEEMNWLDEIDGKEFDPKRLDMEGRAVVCDFGLFVLFNLYCPNETNETRRPYKMNF
LHCLQERVRMLRQAGREVIIVGDINIMRAPIDSGEGGIRTSAEQHYEHPARRILDNWIYP
KGDMVDVVRESWPDRDDMFTCWNQKLDARSANYGSRIDLILCTPGLRPWIKGGDILNKVY
GSDHCPVYIDLHESINHPEKGEIQLKDMLNPSNRTQSTAIIYPNDIPRNTPEPPRFATKF
FDEFSGKQTTLKSFFGGGGGGGSSRKTKQDEDASTSPSLTPQPATPAIATTSIVPETIED
KSIKLQNNIPIIPSPVEESMSTPFSLARAAFDSIGAEETDSSQAHSTPRAVVGTPTQSTS
SYHRSPSRENAIDMTQFEDEPISSPSNSIAGSSKVKQPVKAKSVKLINAKTATTSGQTKL
SSFFSQPPQPTQTKRKSSPAQSPSIQPHSKSAKTSIPSPKPSPSRSPSASFSRQSIPPPS
PSFDIGSQEGLTPQEDELIAQALLQAEQDRKAKNDSAKPVWGELFAKKLPPLCAVHQKPC
KDFLVMKPGPNKGKRFWLCSLPVGAGYDTGRTKRPREDVNHKFRCDFFLWDSANSRKEKP
NENKLS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattctcacttggaacgtcaacgtcctcaggacatgtttggactatcacccattc
agttcgatgaagaagaagaatgtcgaaggattactggatgagctaggtgctcagatatac
tgttttcaagaacataagacggttcgaagtaaattagagaaatcaatggcagtacctgga
ccttatgatggattttggacttttcccagatctaaaacaggctactcaggagtatgtaca
tatgtagattcaagatattgtgtaccattaaaagctgaagaaggtataactggattatta
ttggaagataaatcaagtacgatgaaaccaccttggaaagaagaagagaaaataggtggt
tatcccgaggatatcgaagagatgaattggttggatgaaattgatggtaaagaatttgat
ccgaaacgattggacatggaaggtagagctgttgtatgtgatttcggcctattcgtccta
ttcaacttgtattgcccaaacgaaaccaacgaaacccgaagaccatataaaatgaatttc
ctacattgtctacaagagcgagtgcgaatgttgagacaggcaggtagagaagtaatcata
gtaggagatataaatataatgagagcaccgatagattcaggagaaggtggaataagaact
tctgcagaacaacattatgaacatcccgctcgaaggatattggataattggatatatcca
aaaggagatatggttgatgtggtgagagaaagctggcctgatagggatgatatgtttact
tgttggaatcaaaagttagatgctagatctgcaaattatggatctcgaattgacttgatt
ctctgtacaccaggattaagaccttggattaaaggaggagatatattaaataaagtctat
ggatcagatcactgtccagtctatatcgatctccacgaatcaatcaatcatcctgaaaaa
ggcgaaatacagttaaaagacatgttgaatccttcgaatagaactcaaagtacagcaatc
atttatcctaatgatatacctagaaatacacctgaacctccaagattcgctacaaagttc
tttgatgaattttcaggtaaacaaactactcttaaaagtttcttcggtgggggtgggggc
ggcggatcatcaagaaagaccaaacaggatgaagatgcgagtacaagtccctcattgacc
cctcagccagcaacacctgctatagctacgacctcgatcgtaccagagactattgaagat
aaatcgataaaattgcagaacaatattcctataataccttccccagtagaagagagtatg
tccacgcccttcagtctcgctagagctgcttttgattcgatcggtgctgaagaaacagac
tcttcgcaagcgcattcgacgcctcgtgcagtagtgggcactcctacccagtctacatct
tcttatcacaggtccccttccagagagaacgctatcgatatgactcaattcgaagacgaa
cccatctcctcaccctccaactcgattgctggatcgtctaaagtcaagcagcctgtcaaa
gccaaatcagtcaagctaatcaacgccaagaccgcaactacttccgggcaaacgaaatta
tcttcatttttctcacaaccgccgcaacctacgcagaccaaacgaaagtcctctccagct
caatctccttcaattcaaccacactctaaatccgctaaaacatcaataccgtctccgaaa
ccatcaccttccagatcaccttcagcctcattttctcgtcaatccataccgccgccttct
ccctcatttgatattggatcacaagaaggattaacacctcaagaagatgaacttatcgct
caagcattgttgcaagctgaacaagatagaaaagctaagaatgattcggcaaaaccagtg
tggggcgagttgtttgcgaagaaacttccgcccttatgcgccgttcaccaaaagccttgt
aaagattttctggtgatgaaaccgggtccgaacaaaggtaaaagattctggctgtgttcg
ttacccgttggagcaggttatgatactggccgaactaaaaggccgagagaagatgtcaat
cataagttcagatgtgacttcttcttatgggatagcgcgaactcgagaaaagagaagccg
aatgagaataagctgagttag
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