Kwoniella shivajii: 87959706
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Entry
87959706 CDS
T10982
Symbol
IL334_007576
Name
(RefSeq) pre-mRNA-splicing factor SLT11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ksh Kwoniella shivajii
Pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87959706 (IL334_007576)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksh03041
]
87959706 (IL334_007576)
Spliceosome [BR:
ksh03041
]
Complex B
Other components
Prp19-related factors
87959706 (IL334_007576)
Complex C
87959706 (IL334_007576)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH
RRM_YTH1
zf-CCCH_3
zf-CCCH_PARP12
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
87959706
NCBI-ProteinID:
XP_062795317
LinkDB
All DBs
Position
11:join(397724..397747,397840..397874,397937..397947,398013..398041,398131..398285,398397..398476,398566..398767,398883..399024,399163..399286,399404..399609)
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AA seq
335 aa
AA seq
DB search
MPAKHDINKVGVESSDFPILCETCLGPNPYVRMTKQEFGNECKICNRPFTVFRWNPGAGG
RYKKTEICNTCAKIKGVCQTCLLDLEYGLPVQVRDAALGRKSQAPQSDINKQYYIQNLEA
QMADSPDGQTFDSEVANRAGREMLKGIARSDPYYKRNRPHICSFFVKGECTRGGECPFRH
EIPKEGELAKQNIVDRYYGKNDPVAKKMLREQAEIKGMKAPDDKSITTLLFLGLPQTTES
EVRASLVGACPFVKPIEIRSLTIVEASHCAFVNFKLRNLAEKVAEALTAQGGIEVSGKKA
KVVWGRARPQKGKAAIAAGESSGSTSTATAEMTSS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccagctaagcacgacatcaacaaagttggtgtggaaagttctgattttcctatattg
tgcgaaacatgtctaggtccaaatccatatgttcgaatgacgaaacaggaattcggaaac
gaatgtaagatttgtaatcgaccttttacagtattcagatggaatccaggagcgggaggt
agatataagaaaaccgaaatctgtaatacgtgtgccaagataaaaggtgtttgtcaaacc
tgtctattagatctcgaatatggtttacctgtacaagtgagagatgcggctttgggacga
aagagtcaagctccacaatcagatatcaacaagcaatattacatccaaaatctcgaagct
caaatggctgattcacccgatggacaaacgtttgattcagaagttgcaaatagagcagga
agagaaatgttaaaaggtatagcaagatcagatccttattacaagagaaatagaccacat
atttgtagtttcttcgttaaaggtgaatgtacgagaggtggtgaatgccctttcagacat
gaaatacctaaagaaggagaattggcaaaacaaaatatcgttgacagatattatggcaag
aacgatcctgtagcaaagaagatgttgagagaacaagctgagatcaaaggtatgaaagca
ccggatgataagtctatcacaacattgttattcctcggtttacctcaaaccacagaatca
gaagtcagagcttctttggttggtgcttgtccattcgtcaaacctatagaaatcagatcg
ttgactatagtagaagcttctcattgtgcattcgtgaatttcaaattgcgtaatttggcg
gagaaggtagcagaagcattaactgctcaaggtggaattgaagtttcaggtaaaaaagct
aaagtagtatggggaagagcaagaccacaaaaaggaaaggcagccatcgcagctggagaa
tcaagtgggtcgacatcaacagcaactgctgaaatgacaagttcatga
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