Kwoniella shivajii: 87959707
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Entry
87959707 CDS
T10982
Symbol
IL334_007577
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
87959707 (IL334_007577)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87959707 (IL334_007577)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
87959707 (IL334_007577)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
87959707 (IL334_007577)
Prokaryotic type
87959707 (IL334_007577)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
87959707
NCBI-ProteinID:
XP_062795318
UniProt:
A0ABZ1DBB3
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All DBs
Position
11:complement(join(399941..400111,400234..400419,400521..400590,400664..400770,400859..400876,400936..400952,401018..401080,401149..401200,401297..401505,401590..401845))
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AA seq
382 aa
AA seq
DB search
MPPQARSISSYFKPTGVVAATSSSTTTAAGAGAGAGLTTPEKKKGILSEAAKRAIEEGLS
AAKQDEEEPEPSKKKQRIDSSPSTSKVADIFTKPNLTASPTNKLPIVRSKTREDLRARIA
EKPDWINKLSLEIDTMGEDWLLALQDELTKSYFLNLKEFITNEQKTKKVFPPAEDIYSWS
RLCPLKDIRVVIIGQDPYHDDGQAHGLAFSVRKGVRVPPSLRNMYKEMHDEIPGFVIPKH
GDLTEWAKHGVLLLNTSLTVRAHEAGSHANKGWDTFTAAVLKVVTSRLSPGPSIASAVGE
KVPGGNGVVFMAWGAHAAKMCAGVDNKKHLILKSAHPSPLSASRGFLGNNHFKKANEWLQ
LKYGPQGGIDWEALGDNGKPTT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcaagcaagatcgatctcatcctacttcaaacctacaggagtggtagctgcc
acttcttctagcacaacgacagctgcaggtgcaggtgcaggtgcaggactgaccactcca
gaaaagaaaaagggtatcctaagtgaagctgccaaaagagctatagaagaaggtttatca
gctgccaaacaagatgaagaggagccagaaccatcgaagaagaaacaaaggattgattcc
agtccatccacatcaaaggtagctgatatattcactaaaccgaatttgactgcctcaccg
acgaataagctgcccatagtgagatcaaagacacgcgaagacttaagagctagaatcgca
gagaaaccagattggattaataaattgtcattggaaatcgatacaatgggtgaagattgg
ttattggctttacaagatgaactgacaaaatcgtatttcctgaatcttaaagagttcatt
accaatgaacaaaagactaagaaagtgtttccaccagccgaggatatatactcctggtct
cgattgtgtcctttgaaggatatcagagtggtcattattggtcaagatccatatcatgac
gatggtcaagcacatggtctggcattttcagtccgaaaaggtgttcgagtcccaccttct
ttacggaacatgtacaaagagatgcacgatgagatacctggattcgttattcctaaacat
ggagatttgactgaatgggctaaacatggtgttctgttgttgaatacttctttaaccgtc
cgagctcatgaggcaggatctcacgcgaacaaaggatgggacacgttcactgctgccgta
ctgaaagtggtaacatcaagattatcgcctggaccatctatagcttctgccgtgggagaa
aaagtgccgggtgggaatggtgtggtgtttatggcttggggtgcacatgcagctaagatg
tgtgcgggagtagataataaaaaacacttgatactgaaatcagctcatccatctccttta
tcagcaagtagaggtttcttaggtaacaatcacttcaaaaaagcaaatgagtggttacag
cttaaatacggaccacaaggtggaatcgattgggaagctctaggtgataatggcaagccc
acaacataa
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