KEGG   Kwoniella shivajii: 87959726
Entry
87959726          CDS       T10982                                 
Symbol
IL334_007596
Name
(RefSeq) uncharacterized protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ksh  Kwoniella shivajii
Pathway
ksh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    87959726 (IL334_007596)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87959726 (IL334_007596)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     87959726 (IL334_007596)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I
Other DBs
NCBI-GeneID: 87959726
NCBI-ProteinID: XP_062795337
LinkDB
Position
11:complement(join(460031..460287,460360..460399,460460..460527,460591..460772,460844..460935,461001..461233,461288..461383,461443..461504,461564..461627,461693..461864,461922..462182,462243..462335,462394..462501,462558..462619,462696..462992,463059..463133,463199..463328,463431..463901,464031..464066,464126..464175,464235..464289,464357..464359))
AA seq 968 aa
MPPMYSSESTSAPKAHFEMDRETEDRFCKFFERMPPKMDGMVRFFDRGDYYTVHGSDAVF
IANEVYKTTNVIKYLGSGKSATSSSSASKGLTSVNINTSLTKSFLREALTVKQMRIEIYV
PEEKVPGRKDHTKWILAKSASPGNLMQLDDLLFNDRDLLANAVIMSIKIQSKEGGRNVGI
AYVDTSERLIGVGEFVEDEGFGNTESLLIQLGVKECIMQSDDKRSDHELTKLKALVERCG
VIVTERKAADFQARNVEQDLNRLLDESHAGVALPEFDLKIAMSSVSALLIYLNLLADTTL
HGQYRLHKHDLSQYMKLDASALKALNLMPQPNELGGSKDMNLYGLLNRCKTSQGQRLLAR
WLKQPLVNLHEITQRQNVVEAFVDDSNARRTIQDTYLKAMPDFHRISKKFHRRIAGLEDV
VRVYQAVQHLPRLIGTLEGVDPVDSVAKDLIEEIYLKPLRDRSADLETYTQMVEDTIDLE
ELRNHNFVLLPTFDDDLQKLKDDLLRIRDELDEEHVRVGQELGLDIEKKLHLEQHQVYKY
SFRVTKAEAGSIRGKRGYIDLATQKSGTIFTTSRLKALSENYFELQASYEKKQRHLVKEV
VGVAATYIPILEILDNIIAAIDVVISFAHVSALAPIPYVKPKLTEKGTGDVVLRNARHPC
LEVQPDVTFIPNDHDMRKNSSEFIILTGPNMGGKSTYIRQIGVIALLAQIGCFVPADEAE
LPIFDCILARVGAGDSQLKGVSTFMAEMLETATILKSATKDSLIIIDELGRGTSTYDGFG
LAWAISEHIASKIRCFCLFATHFHELTTLDQSLSHVKNLHVEALVTDKRDGDGRQDRNIT
LLYQVKEGVCDQSFGIHVAELANFPESVVRLAKRKAEELEDFGDGVPDESLMKYSKTETD
EGTALIKDFLDTWKSRTAGSAELGGGIDGDEEMGMSEEDMLVELKKTAEEFKERFESNEW
VQGVMSTF
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccgcctatgtacagctcagagtctacgtctgctccgaaagctcatttcgagatggac
agagaaacagaagacagattctgcaagttcttcgaaaggatgcctcctaaaatggatggt
atggttagattcttcgatcgaggggactattacaccgttcatgggtcagacgcagtattc
atagccaatgaagtatataagactaccaatgtcatcaaataccttggatcaggtaaatcc
gccacatccagttcgtcagcttccaagggcttaacatcagtgaatataaatacatccctc
accaaatcatttctgagagaagcattaacagtcaaacaaatgagaattgagatatacgtc
ccagaagagaaagttccaggaagaaaagatcatacgaaatggatacttgcaaaatcagct
tcaccgggaaatttaatgcaattagatgatttgttattcaatgatagagatttattagca
aatgctgtgataatgtcaatcaaaatacagtctaaagaaggtggaagaaatgtcggtatc
gcttatgtcgatacgagcgaaaggttgattggtgtaggggaattcgtggaagacgaaggg
tttggaaataccgagtctctattgatccagctcggtgtgaaagaatgtatcatgcaatca
gacgataaacgttcggatcacgagttgaccaagctgaaagcactggtcgagcgatgcggg
gtcattgtgaccgagcgcaaggcggccgatttccaagctcgaaacgttgagcaagatctg
aatcgattattagatgagtctcatgctggagttgcgcttcccgaattcgatctaaaaata
gcaatgtcgtctgtttcagctctcctcatctacctcaacctccttgccgatacaacgtta
catggacaatatcgtctacacaaacatgacctctctcagtatatgaagctcgatgcttcg
gcattgaaagctttgaatctcatgcctcagcctaacgaactgggagggagcaaagatatg
aatttgtatggtttgttgaataggtgcaagacaagtcaaggtcaaagattgttggctaga
tggttgaaacaacctttagtgaatctacacgaaatcacacaacgtcagaacgttgttgag
gcttttgtagacgactcgaatgctagacgaaccattcaggatacatacctcaaggcgatg
cccgactttcatcgaatctccaagaaattccaccgtagaattgcgggacttgaagatgtc
gtcagagtttatcaagctgtgcagcatcttcctaggcttataggaacactggaaggcgtt
gaccctgtggacagtgtagccaaggatctcattgaggaaatctatttgaaaccacttagg
gatcgctcggcagacttagagacatatacacaaatggtagaggatactatcgatttagaa
gaactccgaaatcacaatttcgtccttcttccaactttcgatgacgatctgcaaaaattg
aaggacgatttgctgcgaatacgtgatgagctcgatgaagaacacgtccgagttgggcaa
gagttaggtctggatattgaaaagaagttacaccttgaacaacatcaagtgtacaagtat
tccttcagggtcactaaagctgaagctggttcgataagagggaaaagagggtatatcgat
ttagctactcagaaatcaggaacaatcttcaccacatcacgtcttaaagcattaagtgag
aattactttgagttgcaagcctcttatgaaaagaagcaacgacatctggtcaaagaggtc
gtaggagtagccgcgacctacatccctattctcgagatactggataatatcattgctgct
atagatgtggttatcagctttgcacacgtttcggcacttgcacctataccgtatgtcaaa
cccaaacttaccgagaaaggcactggtgatgtcgtacttcgaaatgctcgacatccatgc
ttggaggtacagcctgacgtgacattcatcccaaacgatcatgatatgcgtaaaaattca
tccgagttcatcattcttactggaccgaatatgggtggtaaatccacttatatccgacaa
attggtgtcatagctttactagctcaaataggatgtttcgtccctgcagatgaagctgag
ttacctatattcgattgcatactggctcgagtgggtgcgggagatagtcaacttaaaggt
gtttcgacctttatggctgaaatgctggaaactgctaccatcctcaaatccgcgaccaaa
gattccctgatcatcatcgatgaattaggaagagggacatcgacatatgatggattcggt
ttagcttgggctattagcgaacatatagcgtccaagatcagatgtttctgcttgttcgct
actcatttccacgagcttacaactctagaccagtcactctcacacgttaaaaatttacat
gtggaagcgctagtaacggataaaagggatggcgatggtagacaagataggaatatcacc
ttgctataccaggtgaaagagggtgtctgcgatcaaagtttcggtatacatgttgctgag
ctggctaatttccccgaaagtgttgttagactcgcgaagcgaaaagcagaagaactggaa
gacttcggagatggcgttccggatgagtctcttatgaaatacagtaaaacagagacagac
gaaggaacagcactcatcaaagactttcttgatacttggaaatcgcgtacagcaggttct
gcagagcttggcggaggaatagatggggatgaggaaatgggaatgagtgaagaagacatg
ttggtggagttaaagaagacagcagaggaattcaaagagagatttgagagtaatgaatgg
gtgcaaggagtcatgagtaccttttga

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