Kwoniella shivajii: 87959744
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Entry
87959744 CDS
T10982
Symbol
IL334_007614
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87959744 (IL334_007614)
03012 Translation factors [BR:
ksh03012
]
87959744 (IL334_007614)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksh04147
]
87959744 (IL334_007614)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
87959744 (IL334_007614)
mRNA cycle factors
Stress granule specific factors
87959744 (IL334_007614)
Translation factors [BR:
ksh03012
]
Eukaryotic type
Initiation factors
eIF-4
87959744 (IL334_007614)
Exosome [BR:
ksh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
87959744 (IL334_007614)
Exosomal proteins of bladder cancer cells
87959744 (IL334_007614)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
tRNA-synt_1b
UvrD-helicase
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
87959744
NCBI-ProteinID:
XP_062795355
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All DBs
Position
11:complement(join(515697..515879,515942..516697,516812..516992,517065..517142,517456..517463))
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AA seq
401 aa
AA seq
DB search
MSDAKPEAEGGLQMDGDLIESNWNQVVDNFDNMELKGDLLRGVYAYGFERPSAIQQRAIM
PIITGRDCIAQAQSGTGKTATFSISILQRIDTTVKKTQALILAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDMAKLAEGPHVVVGTPGRVFDMINRGALKSDAVKMFCLDEAD
EMLSTGFKDSIYDIFQLLPAETQVVLLSATMPPEVLEVTKKFMRDPIRILVKKDELTLEG
IRQFYIAVEKEEWKLDTLCDLYETVTITQAVIFCSTRRKVDWLTQKLHEREFTVSAMHGD
MDQTQREVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPASKENYIHRIGRGGR
FGRKGVAINFVTQDDVKMLREIETYYNTQVDEMPLNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgctaaacccgaggccgaaggtggtcttcaaatggacggagatttgatcgaa
tccaactggaaccaagttgttgacaacttcgacaacatggaactcaagggtgaccttctc
cgaggtgtatacgcttacggtttcgagagaccttccgccattcaacaaagagctatcatg
cccatcatcaccggccgagactgtatcgctcaagctcaatccggtaccggaaagactgcc
actttctccatctccattctccaaagaatcgacaccaccgtcaaaaagactcaagctctt
atccttgcccctacccgagagcttgctcaacaaatccaaaaggttgtcatcgcccttggt
gactacctcaatgtcgactgtcacgcttgtgtcggtggtactgccgtccgagaggacatg
gccaagctcgctgaaggtccccacgttgtcgtcggtacccccggtcgagtattcgacatg
atcaaccgaggtgctctcaaatccgatgccgtcaagatgttctgtctcgacgaagccgat
gagatgctttccaccggattcaaagactccatttacgacatcttccaacttctccccgcc
gagactcaagtagtcctcctttccgccaccatgccccctgaggtcttggaagttaccaag
aaattcatgagagaccccatccgaattctcgtcaagaaggatgaacttactcttgaaggt
attcgacaattctacatcgccgttgagaaggaggagtggaaacttgacactctttgtgat
ctttacgagaccgtcaccatcacccaagccgttatcttctgttctacccgaagaaaggtc
gactggctcacccaaaaactccacgagcgagaattcaccgtctccgccatgcacggtgac
atggaccaaactcaacgagaagtcatcatgaaggagttccgatctggttcttcccgagtc
ttaattgccactgacttgcttgctcgaggtatcgatgttcaacaagtttctttggttatc
aactacgatctccccgcctccaaggagaactacattcacagaatcggtcgaggtggtcga
ttcggacgaaaaggtgtagccatcaacttcgttactcaagacgacgttaagatgctccga
gaaattgagacctactacaacacccaagttgatgagatgcctctcaacgttgccgacctc
atttaa
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integrated database retrieval system
