Kwoniella shivajii: 87959875
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Entry
87959875 CDS
T10982
Symbol
IL334_007745
Name
(RefSeq) uncharacterized protein
KO
K14571
ribosome biogenesis ATPase
Organism
ksh Kwoniella shivajii
Pathway
ksh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
87959875 (IL334_007745)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ksh03009
]
87959875 (IL334_007745)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
87959875 (IL334_007745)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
AAA_28
AAA_3
Viral_helicase1
nSTAND3
AAA_18
AAA_17
RNA_helicase
AAA_2
Cytidylate_kin2
TsaE
ABC_tran
NPHP3_N
Mg_chelatase
nSTAND_NTPase5
Zeta_toxin
DUF815
NACHT
IstB_IS21
Sigma54_activat
NB-ARC
AAA_7
CPT
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
87959875
NCBI-ProteinID:
XP_062795485
LinkDB
All DBs
Position
11:join(899119..899571,899647..899748,899803..899920,900028..900166,900239..900872,900927..901046,901104..901763)
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AA seq
741 aa
AA seq
DB search
MSGIPSLNSSITSAWATSSSTSSQVPKKRVKRSIGLNNNPSSSSNAPSPNQGESSTTPAN
QTDTHTPTPSVRRKKPRNDPETLSAKYAPPDLKLSLLGGLQVQITQLMEIVVLPLLHPEI
YQYTGVPRPRGVLLHGVPGGGKTQLVKCLAGELGLPFINISAPSIVSGMSGESEKTLRDT
FDEAKKLAPCLLFLDEVDAITPKRETAQREMERRIVAQLLTCMDDLASSEEPVVIIGATN
RPDSLDPALRRAGRFDHEIEMGVPSQEGREEILRVLCSNLRLSGDVDFRWLAKSTPGYIG
ADLTALTTEAGVTAVKRIFEEIGSGERTLPEPDGIENMMIIDDPIFSTLPSDIRETPIAR
FLISHPSPLTSDQLDTLSLTPSDFIEALKIVQPSAKREGFATIPDVTWNDIGALSTVRDE
LHMAIVQPIRHPELFSVVGIDAPSGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELL
NKYVGESEKAVRQVFARARASSPCVIFFDELDALVPRRDESMSESSARVVNTLLTELDGL
DARKAVYVIGATNRPDMIDPAMVRPGRLDKLLYVDLPSPHERFEILKTHTKKTPILEDSW
DTIQKIVVSDKCDGFSGADIAALVREAATLALRNALEQIGAFEVSLENDPSLNLNESGVP
IDNGADKVKVTSEHFELASKKTLPSVSREQRLKYERMRDKYAGLPTKGKRSREGGLTIDD
PNDREKIKKENLNGDVGMSVV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtatcccgtctttgaattcatcaataacatcagcatgggcaacatcatcgtcc
acctcttctcaagtacctaaaaaacgagtaaaaagatcgattggattaaacaataatcca
tcttcatcatcaaatgcaccttctccaaatcaaggagaatcatcgaccacacctgcgaat
caaacagatactcatacacctacaccaagcgttagaaggaaaaaaccaaggaacgatcca
gaaacattatctgctaaatatgcaccaccagatctgaaactatcattgttaggtggatta
caagttcaaatcactcaattaatggaaattgtggtcctgcctttactgcatcctgaaata
taccaatataccggtgtacctagaccaagaggtgtcctactacatggtgttccaggtggt
ggtaaaacacaattagtgaaatgtttagctggtgaattgggtctaccttttatcaacata
tctgcacctagtatcgtctctgggatgtcaggagaatcggaaaagacacttcgggatact
ttcgatgaagcaaaaaaactagccccatgtctattattcctagatgaagtagatgcaatc
acgcccaaaagagaaacagctcagagggaaatggagaggaggatagtcgctcaattgttg
acttgtatggatgacttagcaagttcagaagagcctgtcgtaatcataggagcaacaaac
cgacccgattcgctggacccagcactgagaagagcaggtagattcgatcatgagatagag
atgggtgtgcccagtcaagaaggtagagaagaaatccttcgagtactgtgttccaatctg
cgattatcaggcgatgtagatttccgttggcttgccaaatccactccaggctatatcggt
gcggatctaacagctttgactaccgaagcaggtgtaacagctgtgaaacgtatatttgaa
gagataggatctggtgaaagaacattacctgaacctgatggaatcgaaaatatgatgatt
attgatgatccaatattctcaacattaccttctgatatcagagaaacgccaatagcaaga
ttcctaatatcacatccatcaccacttacttcagatcaattagatacgttatcgttaaca
ccttccgatttcatcgaagctttgaagatagttcaaccttcagctaaaagagaaggtttc
gctactataccagatgtaacatggaacgatataggtgctctaagtactgtaagagacgaa
ttgcatatggctatagtacaacctattcggcatcctgaactcttctcagtcgtcggtata
gacgctccaagtggtgtactgctttggggtccaccaggttgtggtaaaactctattagca
aaagctgtagcaaacgaaagtagagcgaacttcatcagtgtcaaaggtcctgaattattg
aacaaatacgtcggtgaaagtgaaaaagctgtcagacaagtatttgcaagagcaagagct
tcttcaccttgtgtgatatttttcgatgagttggatgcgctagttcctaggcgtgatgaa
tcgatgtctgaatcctcagcaagagtagtcaatactttactcactgaattagacggatta
gatgcaagaaaagcagtttatgtgattggtgctaccaatcgaccggatatgatcgatcca
gcgatggttagaccaggaagacttgataaacttctatatgtcgatctaccttcacctcat
gaaaggttcgaaatcttgaaaacacatacgaagaaaacaccgatactggaagattcatgg
gacacgatacagaaaatcgtggtatcagataaatgtgatggattctcgggagcagatata
gctgctcttgtcagagaagctgcaactttggccttgaggaatgcattagaacagattgga
gcctttgaagtttctttagaaaacgatccttccctaaacctgaatgaaagtggagtacca
attgataatggagcggataaagtcaaagtgacttctgaacatttcgaattagcttcaaag
aaaacattacccagtgtaagtagagaacaaagattaaagtatgagagaatgagagataaa
tatgctggtctacctactaaaggtaaaagaagtagagaaggtggattaactattgatgat
ccgaatgatagagaaaagatcaaaaaggagaatcttaatggtgatgtaggtatgagtgtg
gtctag
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