Kwoniella shivajii: 87960041
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Entry
87960041 CDS
T10982
Symbol
IL334_007911
Name
(RefSeq) uncharacterized protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ksh Kwoniella shivajii
Pathway
ksh03022
Basal transcription factors
ksh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87960041 (IL334_007911)
09124 Replication and repair
03420 Nucleotide excision repair
87960041 (IL334_007911)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksh03021
]
87960041 (IL334_007911)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87960041 (IL334_007911)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
87960041 (IL334_007911)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
87960041 (IL334_007911)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
87960041
NCBI-ProteinID:
XP_062795651
LinkDB
All DBs
Position
11:complement(join(1354399..1354594,1354705..1354741,1354805..1354943,1355007..1355147,1355225..1355514,1355571..1355612,1355673..1355842,1355939..1356216))
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AA seq
430 aa
AA seq
DB search
MVPPPPMESRFYPKTTPPSVLLVILDIHPLSWSLLSSPPPLPPFTEHPGIDKAQATPMSL
PDFVTILMVFLNAHLASRWGNEVVIYGASAGRAKLLYPPPPNAVAGPSKPRPNSYHPFQL
LDSRIEQGLKEMAAEEQERLENGNVKSLNEPPSMVSALTKALCFVNRIQPSSSTAAALID
PTSQDASGSNSNGPDRPETRILIINATPGSNISNSDQSNGVSGENGDDGDNNSKGQGSKG
GQMRGGYVGLMNCVFAAQKAKVPIDVLSLPPPSIDASPPIFLQQAAHLTEGIYWQWNGRG
ALLQYLHAIYLPPPSLRHHPFAVPPQDAVGFRAVCFCHHKTLDVGFVCSVCLSIFCEPRS
VCLMCKTRFPIKSIPTLKTLATYIEPIPVPDTVPPPVIQKGSKMHQINENAKKDKSKAVN
GDRSDPIEID
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtcccacctccccctatggaaagtcgcttctacccaaagaccactcctccctccgtt
ctgctggtcattttagatatacaccctttatcatggtcgctcttgtcttccccacctcca
ctacctcccttcaccgaacaccctgggatcgacaaagctcaggcaacacctatgagcttg
ccagactttgtcactattctcatggtgtttctgaatgcccatctggccagtaggtggggc
aacgaagttgtaatatatggtgcttcagcaggaagagccaaacttctctaccctccacct
ccaaatgctgtggctggaccatcaaagcctcgtcccaactcctatcatccctttcagtta
cttgatagcaggatagaacaaggtttgaaagaaatggcggcggaagagcaggaaagattg
gagaatggaaatgtcaagtctctgaacgaaccaccttcaatggtatcggctctcacaaag
gcgttatgctttgtaaatcgtattcaaccttcttcatctaccgctgcagctttgattgat
ccgacttctcaagatgcttctggatcaaattcgaatggacctgatagacctgaaacacgt
attctgattataaacgctactccaggatctaatatatccaattccgatcaatcaaatggt
gtcagtggagaaaatggtgatgacggtgacaataattcgaaaggacaaggttcaaaagga
ggtcaaatgagaggtggttatgttggtttgatgaattgcgtgtttgcagctcagaaagca
aaagtacctatagatgtattatccttgccgccaccttcgatagatgcttcaccacctatc
ttcttacagcaagctgctcatctgaccgaaggtatatattggcaatggaatggtagaggt
gcattgttgcaatatctccatgcaatatacctccctccaccttcactaagacatcatcct
ttcgcggtacctcctcaagacgcagtgggtttcagagctgtatgtttttgtcatcacaag
acgttagatgtcggattcgtctgcagtgtttgcctaagtatcttctgcgaacctagatct
gtgtgtctgatgtgcaaaactcgattcccaatcaaatccatacctacactcaagactctg
gcgacttatatcgaacctattccagtaccagatactgttccgccacctgtaattcaaaaa
ggctcgaagatgcatcagatcaatgaaaacgcgaagaaagataaatcaaaggctgtcaat
ggagatagaagcgatcctattgaaattgattag
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