Kineothrix sedimenti: V6984_06825
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Entry
V6984_06825 CDS
T10997
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6984_06825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksi03019
]
V6984_06825 (recQ)
03400 DNA repair and recombination proteins [BR:
ksi03400
]
V6984_06825 (recQ)
Enzymes [BR:
ksi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6984_06825 (recQ)
Messenger RNA biogenesis [BR:
ksi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V6984_06825 (recQ)
DNA repair and recombination proteins [BR:
ksi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V6984_06825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Pox_I6
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XAH75465
LinkDB
All DBs
Position
1441266..1443113
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AA seq
615 aa
AA seq
DB search
METAEKILKQYFGYDTFREGQKELVGSILEGKDTFGVMPTGAGKSICFQVPALIMEGITL
VVSPLISLMKDQVEGLNQAGVHAAFLNSSLTSGQYFKALEYAKNGRYQIIYVAPERLVTE
SFLDFALNVQISMVVVDEAHCVSQWGQDFRPGYLKIVEFISKLPSRPVVSAFTATATKEV
REDIVYLLALQNPVIVTTGFDRPNLYFAVQSPKDKYASMKNYLELHPAQSGIIYCLTRKT
VEEVFERLCGDGFSVAKYHAGLSDRERRTGQEEFIYGRKEIMVATNAFGMGIDKSDVRYV
IHYNMPKNMESYYQEAGRAGRDGDAAECILLYGGQDVVTNQFFIDHNQDNEALDEAAREV
VMERDRERLRKITYYCFTNECLRDYILRYFGEYKENYCGNCSNCLSKFEKTEVTDIAKVL
IGCVKTCGQRYGSGVIIDAVHGANTAKIRGYGMNHNPYYGELAKVPVFKLRQVLNYLFLS
EYLKATSDEYAIVKLTEKGNAVLAGDDIVVMKMPKEEEHPAKVSKSKGSGKGAFSGGELT
GREETLFEGLRALRSEIAREEKVPPYIVFSDKTLSHMCVVRPRTEEEMLTVSGVGEFKYR
KYGERFLEAIRNGEK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagcagaaaaaattttaaagcaatatttcggatatgatacattcagagaaggt
cagaaggagctggtgggcagcatcctggagggaaaggatacctttggagtgatgcctacg
ggggcggggaaatccatatgctttcaagtgcccgcgcttatcatggaaggaattacactg
gttgtgtcgccgttaatttcgctgatgaaggatcaggtggaggggttgaatcaggcagga
gtccacgcggcattcttaaacagctcactgacttcggggcaatattttaaagcgttggaa
tacgccaaaaacggcaggtatcagattatctatgtagcccctgaacgcctggtgacggaa
agctttttggattttgccctgaatgtgcagatttcaatggtcgtggtggatgaggctcat
tgcgtgtcacaatgggggcaggatttcaggcccggttatttgaaaatagtggaatttata
agtaaattgccatcccgcccggtagtcagcgcttttaccgctacggcgactaaggaggtg
cgggaggatatcgtttatcttctggcgcttcaaaatcccgtgatagtaactacgggcttc
gaccgccccaatctctatttcgcggtacagtctccgaaggataaatatgcgtccatgaag
aactatttggagctccatcctgcgcaaagcggcattatatattgcctcacgaggaaaacg
gtagaggaggtcttcgaaaggctttgcggcgacggattttccgtagcgaaatatcatgcg
ggactttcggatagggaaagaaggaccgggcaggaagaattcatctacggaagaaaggaa
atcatggtagctactaacgcctttggaatgggaatcgataagtccgacgtccgctatgta
attcattataatatgcctaaaaatatggaaagctattatcaggaagccggaagagcggga
agagacggagatgcggcggagtgtatcctgctttatggaggacaggacgtggtgactaac
cagttttttatcgatcacaatcaagacaatgaggcgctggatgaggcggcccgtgaagtg
gtgatggagcgggatagggagaggcttagaaagataacctattactgttttaccaacgag
tgtctgagagattatattttacgctattttggggaatataaagagaactattgcggtaat
tgttccaattgcctgagcaagttcgagaaaacggaagtgaccgatatcgcgaaggtactg
atcggatgtgtgaagacatgcggacaaagatatggaagcggagtcattatagatgcagtg
catggggcgaatacggcgaagatacgcggatatgggatgaatcacaacccctattacggc
gagctggcgaaggtgccggtatttaagctgcggcaggtgttgaattatctgtttttaagt
gaatacttgaaggcgacgagcgatgaatatgccatcgtgaagctgacggagaaaggaaac
gcagtacttgccggagacgatatcgttgttatgaagatgccaaaggaagaggaacatccg
gcaaaggtatcaaaaagcaaaggaagcggaaagggagcattttccggaggagaacttacc
ggaagagaggagacgctgttcgaagggctgcgtgcgctccgctcggaaattgccagagag
gaaaaggtgccgccgtatatcgtattttcggacaagacgctcagtcatatgtgcgtggtc
aggccccggacagaggaagaaatgctgacagtatccggtgtgggagagtttaaatataga
aaatatggtgaacgcttcctggaggcgattagaaatggggaaaaatag
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