Kineothrix sedimenti: V6984_06940
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Entry
V6984_06940 CDS
T10997
Name
(GenBank) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6984_06940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksi03019
]
V6984_06940
03110 Chaperones and folding catalysts [BR:
ksi03110
]
V6984_06940
03029 Mitochondrial biogenesis [BR:
ksi03029
]
V6984_06940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksi04147
]
V6984_06940
Enzymes [BR:
ksi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V6984_06940
Messenger RNA biogenesis [BR:
ksi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V6984_06940
Chaperones and folding catalysts [BR:
ksi03110
]
Heat shock proteins
HSP60 / Chaperonin
V6984_06940
Mitochondrial biogenesis [BR:
ksi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V6984_06940
Exosome [BR:
ksi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V6984_06940
Exosomal proteins of other body fluids (saliva and urine)
V6984_06940
Exosomal proteins of breast cancer cells
V6984_06940
Exosomal proteins of colorectal cancer cells
V6984_06940
Exosomal proteins of bladder cancer cells
V6984_06940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAH75488
LinkDB
All DBs
Position
1465727..1467133
Genome browser
AA seq
468 aa
AA seq
DB search
MIREILYEETGRKKLAEGMRKLCSILNCDGGILLNGSYIMSASSVARQIEGEDLYINQGI
RLASEGITEINARIGCGTKEAAAMLLIQLTACEQMAAAGINPVYLAQEIKKAAGRMADKA
EKTAIRDSIHLEEELLKIAGEEELVEMVLQAMEAGEVVIKDSMQVKTRMDIIKGMTVGGR
LLAGMPATLKRAHVLVTNRSISSFSDLLPLLEKLGSCPLFLVADEIEGEALTLLKTNIAN
RRIAVWAVKAPGIGKRKADMLADLAVLTGTKVYGEYDLLARGELSPEMLGLAESIEVRAG
YSVVEGRTSEISAGRIAGIRKVIEDPKTNFYDQQVLRERIAWLSGQVPVIYAGGETTVEV
KAKKLRLEYAVAYAQSVKKYGMMPEGFADSISVKTAGEKIVLEGIRKSLDNKVVSAELFV
FLLRKITSITALWLTTGAVMVSTGYDREDRELMRGGVDVERLRAGDGY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatacgggagatattatatgaggaaaccggaagaaaaaaactggcagagggaatgcgt
aagctgtgcagtatcttaaactgtgacggcggtattctgctaaatggttcttatattatg
tcggcatcatctgttgccaggcagattgagggcgaagacctgtatatcaatcagggtatt
cggctggcatcggagggcataacggaaatcaatgccagaataggctgtggcacgaaagag
gcggcagccatgctgctgatccagctgacggcctgtgagcaaatggcagccgctggcatc
aatccggtatatctggcgcaggaaataaaaaaggcagcgggccggatggcggataaggca
gaaaagacggcaatacgtgatagcattcatctggaggaggaattgcttaagattgccgga
gaggaagagctggtcgaaatggttcttcaggcaatggaggcaggtgaagtggtcatcaag
gattccatgcaggtgaagaccagaatggatataataaaggggatgacggtcggcggccgg
ctccttgcaggaatgcccgcaacattaaagcgggcacatgtgctggttaccaaccggagc
atttcttctttctccgatttgctcccattgctggagaagctgggaagctgcccgttattt
ctggtagctgatgagatagaaggagaggctctgaccttgctaaagaccaatatcgcaaac
cggagaatagccgtctgggctgtaaaagcgcctggaatcggaaagcggaaagcggatatg
ctggcagacttggccgtacttactggaactaaggtatatggagaatatgacttattagcc
cggggtgagctttcgccggaaatgctgggtctggcggaatccatagaagtgagagcagga
tattccgtagtggagggcagaaccagtgaaatatctgccggacggattgccgggatccgg
aaagtgattgaggacccgaagacaaatttctatgatcagcaggtcttaagggagcggatt
gcctggttgtccggtcaggtgcctgtaatttatgcaggcggtgagacgaccgtggaggtc
aaagcgaaaaagctgcgtctggaatatgcggttgcctacgcccagtcagtaaagaaatac
gggatgatgccggaaggctttgcagacagcatttcggttaaaacagcgggtgaaaaaatc
gtactcgagggaatcagaaaaagtctggataataaggtggtgagcgctgaactttttgtt
tttcttttacggaagatcaccagcatcacagctctgtggctgacgacaggggctgttatg
gtaagcacaggctatgacagggaagacagggaactgatgaggggcggtgtggatgtagaa
aggctgcgggctggcgatggatattaa
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