Kineothrix sedimenti: V6984_10580
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Entry
V6984_10580 CDS
T10997
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ksi Kineothrix sedimenti
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksi03016
]
V6984_10580 (truB)
Enzymes [BR:
ksi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6984_10580 (truB)
Transfer RNA biogenesis [BR:
ksi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6984_10580 (truB)
Prokaryotic type
V6984_10580 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XAH76174
UniProt:
A0ABZ3F2Y6
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All DBs
Position
2186330..2187232
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AA seq
300 aa
AA seq
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MYNGIINVYKEAGFTSHDVVAKLRGILKQKKIGHTGTLDPDAVGVLPVCLGSATKLCDML
TDKSKEYRTEFLLGKITDTQDISGKVLSEREVDVTALQVQEAVLSFVGAYDQVPPMYSAI
KVDGKKLYQLAREGREIERKARSVHIDYITINSIELPKVAMTVGCSKGTYIRTLCHDIGQ
KSGCGAVMTHLERTRAGGFVLADSMTLGDIEKAAVQGTVGKYILPVDAVFKDYKAVMVEE
KFKKLIDNGNSFYAGMLTETGAYGDEEPVRVYGCEGKFYGIYEYCSRDERFTPVKMFLEK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggaattatcaatgtatataaagaagcaggctttacctctcatgacgtggtg
gcgaagcttcgtggaatattgaagcagaagaagatagggcatacggggacgctggatccg
gatgcggtaggagtgctcccggtctgtcttggaagtgctactaagctgtgcgatatgctt
acggataagagcaaggaataccggacggagtttctgcttggaaagataacggatacgcag
gatatttcgggtaaggttctttcagaaagagaggtagacgttactgcattacaggtgcag
gaggctgtcttgtccttcgttggagcctatgatcaggtcccgcccatgtattctgcaatt
aaagtagacggaaaaaagctgtaccagcttgcgcgcgaaggcagggaaatagagcggaag
gcaaggtcggtacacattgattatataacgataaatagtatagaacttcctaaagttgca
atgacggtaggctgttcaaagggtacctatatccggacactatgccatgatatcggtcaa
aagtcaggctgcggagccgtgatgacacatttggagaggacccgtgcaggcggattcgtt
ttagcggattccatgacactcggcgatatagagaaagctgcagtgcagggcactgtaggt
aaatacatacttccggtggatgcggtatttaaggattataaagcggtaatggtagaggaa
aagtttaagaaacttatcgacaacgggaattccttttatgccggtatgctgacggagacg
ggcgcatacggggatgaagaaccggtgcgggtgtacggctgtgaaggaaagttttacggc
atatatgaatattgttcgcgggacgagcggtttactcctgtgaaaatgtttttggagaaa
taa
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