Kineothrix sedimenti: V6984_10900
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Entry
V6984_10900 CDS
T10997
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ksi Kineothrix sedimenti
Pathway
ksi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6984_10900 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksi03019
]
V6984_10900 (rny)
Messenger RNA biogenesis [BR:
ksi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V6984_10900 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
XAH76233
LinkDB
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Position
2246226..2247770
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AA seq
514 aa
AA seq
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MLYVVAVLATLVISVPVSAILATTYRKKIVESKIGNAEDKAREIIDEALKAAETKKRESL
LEVKEESIRTKNELDKEIKERRAEAQRYERRVQQKEENIDKKAEAIEKKETSLTVREESL
AKQREEVAKLNEQRLQELERISGLTSEQAKDYLLKIVEDEVKHESAVMIKEMELRAKEEA
DKKAKEYVVTAIQKCAADHVSETTISVVQLPNDEMKGRIIGREGRNIRTLETMTGVDLII
DDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVEVMIKEEGEAA
TLEVGVHGIHPELVKLLGKMKFRTSYGQNALKHSIEVAQLSGLLAAEMGLDVRMAKRAGL
LHDIGKAVDHEMEGSHIQLGVELCKKYKESATVINAVESHHGDVEPQSLIACLVQASDTI
SAARPGARRETLETYTSRLKQLEDITNNFKGVDKSFAIQAGREIRVMVVPDQITDADMVL
LARDISKQIESELEYPGQIKVNVIRESRVIDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgttgtagcagtactcgcaactctggttatttctgtgccggtttccgcaatt
ttggcgacgacttatcgcaagaagattgtcgaatctaaaattggaaatgcggaagacaag
gcaagggaaattattgatgaagctttgaaagctgccgagacgaaaaagcgcgaatcgctg
ctcgaggtcaaagaagagtccattcgtacaaagaatgagctggataaagagatcaaagag
cggagagccgaagcgcagcgttatgaacgcagagttcagcagaaggaagagaacatcgat
aaaaaagcagaggccattgagaaaaaggaaacgagtttgacagtgagagaggaatcttta
gccaaacagcgtgaagaagttgcgaaactcaacgaacagagattacaggaactggaaaga
atctcgggtcttacctccgaacaggcaaaagattatttattgaaaattgttgaagatgaa
gtaaaacatgaatctgctgtaatgattaaggaaatggaactcagagcgaaggaagaagca
gacaagaaagccaaggaatatgtggttaccgccattcagaaatgtgcggcggatcatgtg
tccgagactacgatatctgtggtacagcttcctaacgacgaaatgaagggcagaatcatc
ggtagagagggaaggaatattagaacccttgaaacgatgacgggcgttgatctcattatt
gatgatacgccggaagcggttattttatcgggctttgatccgattcgacgtgaagtcgca
agaattgcactcgaaaaattgatagtggatgggcgtatccatccggcaagaatcgaggag
atggttgaaaaggcacaaaaagaagtcgaagtgatgataaaagaagaaggtgaagctgct
acgcttgaagtgggcgttcatggcattcatcctgaacttgtaaaattacttggtaaaatg
aaattcagaaccagttatggtcagaacgcgttgaagcattcgattgaggtggctcaatta
tccgggcttttagctgcggagatggggcttgacgtgagaatggcgaagcgtgcaggctta
ctgcatgatataggtaaggcggtagaccatgaaatggaaggttctcatattcaactgggt
gttgagctttgtaagaaatacaaagaatcagccactgtaattaatgcggtagaatcacat
cacggggatgtagaaccacaatccttgattgcatgtctggtacaagcttcggatactatt
tcggcagcaagaccgggtgcgagaagagaaacgttagagacgtatacaagcagactgaaa
caattagaagatatcacaaacaatttcaaaggtgttgacaaatcttttgctatacaggcg
ggtagagagattcgagtaatggtagttcctgatcaaatcactgacgcagatatggtatta
ttggccagagatatttctaagcagattgaatctgaactggaatatccgggtcaaatcaaa
gtcaatgtaatcagagagtcaagagtgatagactatgcgaagtaa
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