Kineothrix sedimenti: V6984_14395
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Entry
V6984_14395 CDS
T10997
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi00470
D-Amino acid metabolism
ksi00550
Peptidoglycan biosynthesis
ksi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6984_14395 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6984_14395 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ksi01011
]
V6984_14395 (murD)
Enzymes [BR:
ksi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V6984_14395 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ksi01011
]
Precursor biosynthesis
Amino acid ligase
V6984_14395 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
XAH72694
UniProt:
A0ABZ3ESV5
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All DBs
Position
complement(2998165..2999535)
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AA seq
456 aa
AA seq
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MDLQGKKVLVIGTGISGIGAVKLLSFAGAAPILYDENKKLEEAAVRNKLPAEVNAEIVIG
SLPKELEEEIVLVVPSPGVPADAAVIEGFRKRGIPVWGEIELAYAYAKGRLIAITGTNGK
TTTTSLVGKIMEDYYESVYIVGNIGNPYTEIAPETKSDTITVAEISSFQLETTQTFRPQV
SAILNITPDHLDRHYTMENYAAVKERIAKNQTKNDICVLNYENEYTRAFGGRCSAHVIFF
SSVRKLERGIYLEGEDIYIAGIGHEQDDNRRKIMTVYDMNLVGLCNVENIMAAIAIALSM
EVPLENILSTIKRFKAVEHRIEFVATKNGVDYYNDSKGTNPDAAIQGIRAMSKPTVLIGG
GYDKHSEYDDWIEAFEGKVKCFVLIGQTADKIEECAIKHGISNIIRADSFDEALKICTRE
AKSGDAVLLSPACASWGMFPNYEVRGNMFKDYVNNL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaggtaagaaagtattggtgataggaacggggatcagcgggattggagcg
gtaaagctgctcagctttgcgggagcggcaccaattttgtatgatgaaaataaaaagctg
gaggaagcggcggtacgaaacaagcttcccgcggaagtaaatgcagagatagtaattggc
agcctgccaaaggaactggaagaagaaattgttttggtggtaccaagccccggcgttccg
gcagatgcggctgttatagaaggctttcgaaagagaggaattcccgtatggggagaaata
gagctggcttatgcctatgccaagggcaggctgattgcgattacgggaaccaacggtaag
actactaccacatctttggtaggaaagattatggaggactattacgaatccgtttatatt
gttggaaatattggcaatccctataccgaaattgccccggaaacaaagtcggataccata
accgtggcagaaatcagcagctttcagctggagactacgcagacctttaggccgcaggta
tcagccatactcaatattacgccggaccatttggacagacattatacgatggaaaattat
gcggcggtaaaggaaagaatcgcgaagaaccagacaaagaacgatatttgcgtattgaat
tacgaaaatgaatataccagagccttcggcggcagatgttccgctcatgttatctttttt
tcctctgtaagaaagctggagagaggaatttatctggaaggggaagatatatatatagca
ggtatcggccatgagcaggatgataacagaagaaaaatcatgactgtatacgatatgaac
cttgtaggactgtgcaacgtggaaaacataatggcggccatcgccatcgcgttgagcatg
gaggtgcctctcgaaaatattttgagtacaataaagcgttttaaagcggtagagcataga
atagaatttgttgctacgaaaaacggagtggactattacaacgattccaaaggcaccaac
ccggacgccgcgattcaaggaatcagagcgatgtccaaacctaccgttttgattggcggc
ggttacgataagcatagtgagtatgacgattggatcgaagccttcgagggaaaggtaaaa
tgctttgtactgatcggacagacagcggataagattgaggaatgtgccataaagcatggc
atcagcaacatcatccgtgccgatagtttcgacgaagcgctgaagatatgcacaagagaa
gcgaaatctggagatgcagtgctcttgtctccggcatgcgcgagctggggaatgtttcct
aattatgaggtgcgcggaaatatgttcaaggactatgtgaacaacctttaa
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