Kineothrix sedimenti: V6984_16585
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Entry
V6984_16585 CDS
T10997
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi00260
Glycine, serine and threonine metabolism
ksi00460
Cyanoamino acid metabolism
ksi00630
Glyoxylate and dicarboxylate metabolism
ksi00670
One carbon pool by folate
ksi00680
Methane metabolism
ksi01100
Metabolic pathways
ksi01110
Biosynthesis of secondary metabolites
ksi01120
Microbial metabolism in diverse environments
ksi01200
Carbon metabolism
ksi01230
Biosynthesis of amino acids
ksi01240
Biosynthesis of cofactors
ksi04981
Folate transport and metabolism
Module
ksi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V6984_16585 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V6984_16585 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6984_16585 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V6984_16585 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6984_16585 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6984_16585 (glyA)
Enzymes [BR:
ksi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V6984_16585 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
XAH73107
UniProt:
A0ABZ3EUU7
LinkDB
All DBs
Position
complement(3466291..3467529)
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AA seq
412 aa
AA seq
DB search
MYSLDEVKKIDPEIAQAIVDEQNRQNSHIELIASENWVSEAVMAAMGSPLTNKYAEGYPG
KRYYGGCDCVDVVENLAIERAKELFGCDYANVQPHSGAQANLAVQFAICEPGDTIMGMNL
AHGGHLTHGSPVNISGKYFNIVPYGVNDEGFIDYDKLREIALETKPKMIIAGASAYARAI
DFKKFREVADEVGAVLMVDMAHIAGLVAAGLHPDPIPYADVVTTTTHKTLRGPRGGLILC
NQEAADKYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALSEDFKKYQQAVVDNAQALCGGL
LKRGIKIVSGGTDNHLMLVDLTNFDLTGKAVEKWLDEAHITANKNTIPNDPKSPFVTSGV
RLGTPAVTSRGMNTEDMDQIAEAIALVIKGGEEKIPEARIIVQKLTEKYPLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtattcattggatgaagtaaagaaaatcgatcctgaaatcgcgcaggcgatcgtggac
gagcagaacagacagaattcccatattgagctgatcgcatcggaaaactgggtaagcgaa
gcggtcatggcagctatgggaagcccgcttacgaacaaatacgcggaagggtatccgggg
aagagatattatggcggctgcgattgtgtggacgtggtagagaatcttgcaatcgaaaga
gccaaggaattgttcggatgtgactatgcgaacgtacagcctcattcgggcgcccaggcg
aatcttgcggttcagttcgcgatctgcgagccgggcgataccatcatgggaatgaacctc
gctcacggcggacatttgacacatggaagcccggtcaatatttccggtaaatatttcaat
atcgttccttacggagttaatgacgaaggctttatcgattatgataaattgagagagatt
gctttggaaacgaagccaaagatgattattgcaggggcttcggcatatgcgagagccatc
gattttaagaaattcagagaagtggcagacgaggttggcgcagtgctcatggtggatatg
gctcatatcgcaggacttgtagcggcagggcttcatcccgatccgattccatatgctgat
gtagtgacgactacgactcataagacacttcgtggtcccagaggcggcttgattctttgc
aatcaggaggctgccgacaaatataatttcaataaggcgatattcccgggaattcagggc
ggtccccttatgcacgttatcgcggcaaaagcggtatgctttaaagaagctctttcggag
gattttaagaaatatcagcaggctgtagtggacaacgcgcaggcgctttgcggcggactc
ttaaaaagaggtatcaagatcgtatccggcggaacggacaaccatctcatgctggttgac
cttacgaacttcgacctgaccggcaaagcggtagagaaatggttggatgaggcacatatc
acggccaataagaatacgattcccaacgatcctaaatctcccttcgtaacaagcggtgtc
cgtcttggaaccccggcggtaacttcccgtggcatgaatacggaggatatggaccaaatc
gcggaggcaattgcactggtaatcaagggcggagaagagaagataccggaggcgaggata
atcgttcagaaattgacagaaaaatacccattaatttaa
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