Kineothrix sedimenti: V6984_17910
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Entry
V6984_17910 CDS
T10997
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V6984_17910 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ksi01007
]
V6984_17910 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksi03016
]
V6984_17910 (aspS)
03029 Mitochondrial biogenesis [BR:
ksi03029
]
V6984_17910 (aspS)
Enzymes [BR:
ksi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
V6984_17910 (aspS)
Amino acid related enzymes [BR:
ksi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
V6984_17910 (aspS)
Transfer RNA biogenesis [BR:
ksi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
V6984_17910 (aspS)
Prokaryotic type
Other AARSs
V6984_17910 (aspS)
Mitochondrial biogenesis [BR:
ksi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
V6984_17910 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Nup188_SH3-like
Motif
Other DBs
NCBI-ProteinID:
XAH73360
LinkDB
All DBs
Position
complement(3721435..3723186)
Genome browser
AA seq
583 aa
AA seq
DB search
MMTKNIYRDITVKEIDESYIGKTVKAAGWVENIRDHGGVSFVDLRDMYGVLQVVIRTPEL
MKEITKEASISVEGLIEKRDEETYNPKLPTGTIELEARSIVILGKVYKQLPFEIMTSRET
REDVRLKYRYLDLRNAKVKENIIFRSQVISFLREKMTEMGFLEIQTPILCASSPEGARDY
IVPSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFAEQEDVFRVGEEILSAAFEKFAPEGFEVTKAPYPIISYKQAMLEFGTDKPDLRNPLR
IMDMTEFFQECTFKPFIGKTVRAIKVHGEMTKGFHEKLLSFAVSLGMGGLGYLEVEEGLT
YKGPIDKFIPEDKKMELLEKAGLAVGDTIFFIADKEERANYYAGQIRNELGIKLDLYEKD
AYRFCYVNDFPMFERDPETKRIGFTHNPFSMPQGGLKALEEENPLDILAYQYDIVCNGIE
LSSGAVRNHDMQIMVKAFEIAGYDEETLKNKFGALYQAFQFGAPPHAGMAPGIDRMLMLL
RGEENIREVIAFPMSGSAQDLMCGAPNDVTEKQLREVHIKVRD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatgactaaaaacatttacagagacatcacagtaaaagaaatcgacgaatcctacatc
ggaaaaacagtaaaagcggcgggatgggtagaaaatattcgggatcacggaggagtatcc
tttgtcgatttgagggatatgtatggagtattacaagtagtaatccggactcctgagctt
atgaaagagattacaaaggaagcttccatatcggtggagggtctcatagaaaaaagagat
gaagaaacatacaatcccaagctacctaccggaaccatagagctggaagctaggtccatt
gtcattctgggcaaggtatacaaacagcttccttttgaaataatgacttccagggaaaca
agagaagatgtccggctgaagtatcgttatttagatcttagaaacgccaaggtaaaagag
aacattattttccgatcccaggtcatctcctttctgcgggagaaaatgacggaaatggga
tttctggagatacagactccgattttatgcgcttcctcgccggaaggagcaagggactat
atcgttccctccagaaaatataaaggaaagttttatgcgcttcctcaggctcctcagcag
tataagcagcttttgatggtgtcgggattcgataaatattttcagatagcgccctgcttc
cgcgatgaggatgccagagcagaccgctcgcccggcgaattttatcagttggattttgaa
atgagcttcgccgaacaagaagatgtttttcgtgtaggagaagaaattctgagcgctgct
tttgaaaaatttgctccggaaggttttgaggtaacaaaggctccttatcccattatcagc
tataagcaggcgatgcttgagtttggtacggataaaccggatttgcgcaatccactcaga
atcatggatatgacagagttcttccaggaatgcacctttaagccatttattggaaaaaca
gtgcgggccattaaggtacacggagagatgactaagggcttccacgaaaagctgcttagt
ttcgcagtgtctctcggtatgggtggcctcggatatctggaggtggaggaaggcctgacc
tataaggggcctatcgacaaattcattccggaagataagaagatggaactgctggaaaaa
gccggtctagccgtgggagatactatttttttcatagcagacaaagaggagagagctaat
tattatgccggacaaattagaaatgaactgggcattaaactcgatttgtacgaaaaggat
gcgtatcgcttctgctatgtgaatgattttccgatgtttgagcgggatcctgagacgaaa
cggattggatttacacacaatcccttctccatgccgcagggcgggttgaaggcgcttgag
gaggagaatcctctggatatattggcatatcaatatgatatcgtatgtaatggcatcgaa
ctatcctcgggagcggtgagaaatcacgatatgcagataatggtaaaagctttcgaaatt
gcaggatatgatgaagaaaccttgaaaaataaatttggagcgctctaccaggcatttcag
ttcggtgcgcctccccacgcaggaatggcgccggggatcgaccgcatgcttatgctgctt
cgaggcgaggagaatatcagagaggtgattgctttccctatgagcggctctgcgcaggat
ttaatgtgcggtgcacctaatgatgtgacggaaaagcagcttcgggaagtgcatattaaa
gtcagagactaa
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