Kitasatospora setae: KSE_12040
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Entry
KSE_12040 CDS
T01648
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ksk
Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksk03016
]
KSE_12040
Enzymes [BR:
ksk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KSE_12040
Transfer RNA biogenesis [BR:
ksk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KSE_12040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BAJ27037
UniProt:
E4N756
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All DBs
Position
1337415..1337996
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AA seq
193 aa
AA seq
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MPADALRVFVALAPPDEAKDELARALRPAYEAHPRLRWNRIEDWHVTLAFLGEVGAAAVP
PLRAALAATAAGHPALRLGLRGGGHFDGRLLWSGVTGDLDGLHRLAAEVRALVRAQGLDH
RDRPLHPHLTLARARRDDPEGVPAGAAVLAGFTGRPWWTPRLHLVGSNPVGDPAPRRYRD
LVSWPLAVPPRSG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccgacgcgctgcgcgtcttcgtcgcgctggccccgcccgacgaggcgaaggac
gagctcgcccgggccctgcggcccgcgtacgaggcgcacccccggctgcgctggaaccgg
atcgaggactggcacgtcacgctggccttcctcggcgaggtcggggcggccgccgtcccg
ccgctgcgggccgcgctggcggccaccgccgccgggcaccccgcgctgcggctggggctg
cgcgggggcgggcacttcgacgggcggctgctgtggagcggcgtcaccggcgacctggac
ggcctgcaccggctggccgccgaggtgcgcgccctggtccgcgcgcagggcctggaccac
cgcgaccgccccctgcacccgcacctcacgctggcccgggcccgccgcgacgaccccgag
ggcgtcccggcgggcgccgccgtcctggccggtttcaccggccgcccctggtggacgccg
cgcctgcacctggtgggcagcaaccccgtcggtgatccggccccgcggcgctaccgcgac
ctggtctcctggccgctggccgtcccgccgcgttccgggtga
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