Kitasatospora setae: KSE_19940
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Entry
KSE_19940 CDS
T01648
Name
(GenBank) putative DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSE_19940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksk03000
]
KSE_19940
03400 DNA repair and recombination proteins [BR:
ksk03400
]
KSE_19940
Enzymes [BR:
ksk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KSE_19940
Transcription factors [BR:
ksk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KSE_19940
DNA repair and recombination proteins [BR:
ksk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KSE_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF7437
Motif
Other DBs
NCBI-ProteinID:
BAJ27817
UniProt:
E4N9D6
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All DBs
Position
2212821..2214386
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AA seq
521 aa
AA seq
DB search
MIDDETRYRAVDSRDARFDGVFFTAVRTTGIYCRPSCPATTPKRANCTFYPTAAAAQGAG
YRACRRCRPDSVPGSPEWNHRADLVGRAVRLIGDGVVDREGVAGLASRLGYSSRQLQRQL
TAELGAGPLALARAQRAQTARLLLQTTELPVTDVAFAAGFASVRQFNDTIREVYDRTPSA
LRGEHGGHQRSPAGGGTLALRLAYRGAIDTGHLLDFLGLRAVPGVEEVVPGPRPGTRTYR
RTLALPYGHGLAEVDGLAPGEPLDRGWLDCRLTLTDLRDLTTAVHRLRALFDLDADPDAV
DARLAADPLLAPLAAARPGLRSPGHVDPHELAVRAVLGQQVTVAAARTLAGRLAERYGTA
LPAADGGLRLLFPTSAALAAADPEHLAMPNARRRALLGLCAALADGTVRLDPGVDREQAA
ADLLALPGIGPWTVGYLRMRALADPDVFLPTDIGVRDGLRALGEPGDPRTAAERSARWSP
WRSYALHHLWSAATAAAATARPAATRPAAPTRTRQPREDQP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgacgagaccaggtaccgggccgtggacagccgggacgcccgcttcgacggg
gtgttcttcacggcggtgcggaccaccggcatctactgccgtccgagctgcccggccacc
acccccaagcgcgccaactgcaccttctacccgaccgcggccgccgcccagggcgccggc
taccgggcctgccggcgctgccggccggactcggtgcccggctcgccggagtggaaccac
cgcgccgacctggtcggccgcgcggtgcggctgatcggggacggcgtggtcgaccgcgag
ggcgtcgcggggctggcctcccggctcggctacagctcccggcaactccagcggcagctg
accgccgagctcggcgccggcccgctcgccctggcccgcgcgcagcgcgcgcagaccgcc
cggctgctcctgcagaccaccgaactgccggtcaccgacgtggcgttcgcggccggcttc
gcctcggtgcggcagttcaacgacaccatccgcgaggtgtacgaccgcacgccgtccgca
ctgcgcggcgagcacggcggccaccaacgcagcccggccggcggcggcacgctggccctg
cggctggcctaccggggcgcgatcgacaccggccacctgctcgacttcctcggcctgcgg
gccgtcccgggcgtcgaggaggtcgtccccggcccccgccccggcacccgcacctaccgg
cgcaccctggccctcccgtacgggcacgggctggccgaggtcgacgggctcgcccccggg
gagccgctcgaccgggggtggctggactgccggctgaccctcaccgacctgcgcgacctg
accaccgccgtgcaccggctgcgcgccctgttcgacctggacgccgacccggacgcggtg
gacgcccggctcgccgccgacccgctgctcgccccgctcgccgccgcccgccccgggctg
cgctcgcccggccacgtcgacccgcacgagctggccgtccgggccgtgctcggccagcag
gtcaccgtggccgccgcccgcaccctggccggccggctcgccgagcgctacggcaccgcg
ctgcccgccgccgacggcggactgcgcctgctcttcccgacctccgccgccctcgccgcc
gccgaccccgagcacctggcgatgccgaacgcccgccgccgggccctgctcggcctgtgc
gcggcgctcgccgacggcaccgtccggctcgaccccggggtcgaccgcgaacaggccgcc
gccgacctgctcgccctgcccggcatcggcccctggacggtcggctacctgcggatgcgc
gcgctcgccgacccggacgtcttcctccccaccgacatcggcgtccgggacggtctgcgc
gccctcggcgagcccggcgacccgcgcaccgccgccgaacgctccgcccggtggtcgccc
tggcgctcctacgccctgcaccacctctggtcggccgccaccgcggcagccgccaccgcc
cgacccgccgccacccggcccgccgccccgacccgcacccgccagccccgcgaggaccag
ccatga
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