Kitasatospora setae: KSE_25840
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Entry
KSE_25840 CDS
T01648
Symbol
holA
Name
(GenBank) putative DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03030
DNA replication
ksk03430
Mismatch repair
ksk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSE_25840 (holA)
03430 Mismatch repair
KSE_25840 (holA)
03440 Homologous recombination
KSE_25840 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksk03032
]
KSE_25840 (holA)
03400 DNA repair and recombination proteins [BR:
ksk03400
]
KSE_25840 (holA)
Enzymes [BR:
ksk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSE_25840 (holA)
DNA replication proteins [BR:
ksk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSE_25840 (holA)
DNA repair and recombination proteins [BR:
ksk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSE_25840 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
NA-iREase3
Motif
Other DBs
NCBI-ProteinID:
BAJ28397
UniProt:
E4NB16
LinkDB
All DBs
Position
complement(2874262..2875257)
Genome browser
AA seq
331 aa
AA seq
DB search
MARKSAPDDLLAPLTVAVGQEELLLDRAVAQVVAAARAADPDTDVRDLAQGVLQPGQLAE
LTTPSLFAERKVIVVRAAQDLSADSVKEVKAYLESPAEEVIMVLVHAGGAKGKGLLDAAK
KAGAREVACAKLTKAGEKLAFIRNEFRTLGRAASPEACQALLDSLGSDLRELSAACSQLT
ADIEGPIDETAVAKYYSGRAEATGFEVADLAVTGRAAEALERLRWALAVGQPPTGITYAL
ASGVRSIGRLASAGRNMRPGDLARELGMPPWKIDRVRQQMRGWTGDGVAAALTAVAEADA
AVKGGSDDPAYALERAVVAVARASRAGSRPY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagagtgcacccgacgacctgctcgccccgctgaccgttgcggtcggtcag
gaggagttgctgctcgaccgcgcggtcgcccaggtggtggccgcggcgcgggcggcggac
ccggacacggacgtgcgggatctcgcgcagggcgtgctgcagccggggcagttggcggag
ctcaccacgccctcgctcttcgcggagcggaaggtcatcgtggtcagggccgcgcaggac
ctctcggccgactcggtcaaggaggtcaaggcctacctggagtcacccgccgaagaagtg
atcatggtgctggtgcacgcgggcggtgccaagggcaagggtctgctggatgcggcgaag
aaggcgggcgcccgggaggtcgcctgcgcgaagctcaccaaggcgggcgagaagctggcc
ttcatccgcaacgagttccgcaccctgggccgggccgccagccccgaggcgtgccaggcg
ctgctggactcgctgggcagcgacctgcgggaactgtcggccgcgtgcagccagttgacc
gcggacatcgaggggccgatcgacgagacggcggtcgccaagtactacagcggccgtgcc
gaggcgaccggcttcgaggtggccgacctggcggtgaccggtcgggccgccgaggcgctg
gagcggctgcgctgggccctggcggtgggccagccgccgaccggcatcacctacgccctg
gcctccggcgtccgcagcatcggccggctggcctcggcgggccgcaacatgcggcccggc
gacctggcgcgcgaactcggcatgccgccgtggaagatcgaccgggtccggcagcagatg
cggggctggaccggtgacggcgtggctgccgcgctcaccgccgtcgccgaggccgacgcc
gcggtgaagggcggttccgacgaccccgcgtacgcgctcgaacgggccgtcgtcgccgtg
gcccgcgcctcccgggcgggctcccgcccttactga
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