Kitasatospora setae: KSE_26940
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Entry
KSE_26940 CDS
T01648
Symbol
orn
Name
(GenBank) putative oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ksk
Kitasatospora setae
Pathway
ksk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KSE_26940 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksk03019
]
KSE_26940 (orn)
03009 Ribosome biogenesis [BR:
ksk03009
]
KSE_26940 (orn)
Messenger RNA biogenesis [BR:
ksk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KSE_26940 (orn)
Ribosome biogenesis [BR:
ksk03009
]
Eukaryotic type
Pre-60S particles
RNases
KSE_26940 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAJ28506
UniProt:
E4NBC5
LinkDB
All DBs
Position
3017346..3017948
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AA seq
200 aa
AA seq
DB search
MNDRLVWIDCEMTGLDLDRDALIEVAALVTDSELNVLGEGVDVIIRPPAEALEGMPEVVR
QMHTASGLLDELADGLTMAEAQERVLAYVREHVPEAGRTPLCGNSVATDRGFLSRDMPEL
EGHLHYRIVDVSSIKELARRWYPRAYYNSPQKGGNHRALADIRESIAELRYYREAVFVPQ
PGPDTDTAREIAARHQLPTT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaccgtctggtatggatcgactgtgagatgaccggcctcgacctcgatcgggac
gccctgatcgaggtcgccgccctggtgaccgactccgagctgaacgtgctcggcgaaggc
gtggatgtgatcatccgcccgcccgccgaggcgctggagggcatgcccgaggtggtgcgg
cagatgcacaccgcctcgggcctgctcgacgagctcgcggacggcctgaccatggccgag
gcgcaggagcgggtgctggcgtacgtccgcgagcacgtgccggaggccggcaggaccccg
ctgtgcggcaactcggtggccaccgaccgcggcttcctgtcccgggacatgccggaactg
gaggggcacctgcactaccggatcgtggacgtctcctcgatcaaggagctggcccgccgc
tggtacccgcgcgcctactacaacagcccgcagaagggcgggaaccaccgcgcgctggcg
gacatccgcgagtcgatcgccgaactgcgctactaccgcgaggcggtgttcgtcccgcag
cccggcccggacaccgacaccgcgcgggagatcgccgcccgccaccagttgcccaccacc
tga
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