Kitasatospora setae: KSE_31090
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Entry
KSE_31090 CDS
T01648
Symbol
groL1
Name
(GenBank) putative 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSE_31090 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksk03019
]
KSE_31090 (groL1)
03110 Chaperones and folding catalysts [BR:
ksk03110
]
KSE_31090 (groL1)
03029 Mitochondrial biogenesis [BR:
ksk03029
]
KSE_31090 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksk04147
]
KSE_31090 (groL1)
Enzymes [BR:
ksk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KSE_31090 (groL1)
Messenger RNA biogenesis [BR:
ksk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KSE_31090 (groL1)
Chaperones and folding catalysts [BR:
ksk03110
]
Heat shock proteins
HSP60 / Chaperonin
KSE_31090 (groL1)
Mitochondrial biogenesis [BR:
ksk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KSE_31090 (groL1)
Exosome [BR:
ksk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KSE_31090 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
KSE_31090 (groL1)
Exosomal proteins of breast cancer cells
KSE_31090 (groL1)
Exosomal proteins of colorectal cancer cells
KSE_31090 (groL1)
Exosomal proteins of bladder cancer cells
KSE_31090 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAJ28919
UniProt:
E4NCI8
LinkDB
All DBs
Position
complement(3509722..3511356)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKTLQFDEDARRSLERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVNEGLRNVAAGAGPAALKKGID
KAVAAVSEHLLSVAREIEGKDDIAAVASLSAQDAQVGELIAEAIDKVGKDGVITVEESNT
FGVELEFTEGMQFDKGYLSPYFVTDAERQEAVLEDPYVLITQGKISSIQELLPLLEKVLQ
AGASRPLLIIAEDVDGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAILGDIATLTGGQV
VSEEIGLKLDQVGLDVLGTARRITVTKDETIVVDGAGDSAEVAGRVAQIKAEIANTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKERKHRLEDAISATRAAVEEGIVAGGGASLV
HAAKVLEGGLGLSGDEATGVAVVRKALAEPLRWIAQNAGLEGYVITSKVAELEAGQGYNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEAAGHGHSHGGH
GHSH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccctgcagttcgacgaggacgcccgccgctcgctggagcgcggtgtcaac
aagctggccgacaccgtcaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgccccgaccatcaccaacgacggtgtgaccatcgcccgcgaggtcgag
ctcgacgacccgtacgagaacctcggcgcgcagctggtcaaggaggtcgccaccaagacc
aacgacgtcgcgggcgacggcaccaccaccgccaccgtgctggcccaggccctggtcaac
gagggcctgcgcaacgtcgccgcgggcgccggcccggccgccctgaagaagggcatcgac
aaggccgtcgccgccgtctccgagcacctgctctcggtggcccgcgagatcgagggcaag
gacgacatcgccgccgtcgcctccctctccgcccaggacgcccaggtcggcgagctgatc
gccgaggcgatcgacaaggtcggcaaggacggtgtgatcaccgtcgaggagtccaacacc
ttcggcgtcgagctcgagttcaccgagggcatgcagttcgacaagggctacctgtcgccg
tacttcgtcaccgacgcggagcgccaggaagccgtcctggaggacccgtacgtcctgatc
acccagggcaagatctcctccatccaggagctcctgccgctgctggagaaggtcctgcag
gccggcgcctcccgcccgctgctgatcatcgccgaggacgtcgacggcgaggccctctcc
accctggtggtcaacaagatccgcggcaccttcaacgcggtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatcctcggcgacatcgccaccctcaccggcggccaggtc
gtctccgaggagatcggcctcaagctcgaccaggtcggcctggacgtgctcggcaccgcc
cgccggatcaccgtcaccaaggacgagaccatcgtcgtcgacggtgccggcgactccgcc
gaggtcgccggccgcgtggcccagatcaaggccgagatcgccaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtctgcgtgatcaag
gtcggcgcggccaccgaggtcgagctcaaggagcgcaagcaccgcctggaggacgccatc
tcggcgacccgcgccgcggtcgaggagggcatcgtcgccggcggcggcgcctcgctcgtc
cacgccgcgaaggtcctggagggcggcctcggcctctccggcgacgaggcgaccggtgtc
gccgtcgtccgcaaggcgctcgccgagccgctgcgctggatcgcccagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctggaggccggccagggctacaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgcgctggagaacgccgcctcgatcgcctccctgctgctcaccaccgagaccctc
gtggtggagaagaaggaagaggaagaggccgcgggccacggccactcgcacggcggccac
ggccacagccactga
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