Kitasatospora setae: KSE_34390
Help
Entry
KSE_34390 CDS
T01648
Name
(GenBank) putative AfsR family transcriptional regulator
Organism
ksk
Kitasatospora setae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
TPR_1
TPR_12
TPR_2
NB-ARC
AAA_16
Trans_reg_C
TPR_10
TPR_8
AAA_22
TPR_16
TPR_14
TPR_7
NACHT
TPR_19
TPR_21
ParA
SLT_L
Motif
Other DBs
NCBI-ProteinID:
BAJ29246
NITE:
KSE_34390
UniProt:
E4NDG5
LinkDB
All DBs
Position
3848355..3851321
Genome browser
AA seq
988 aa
AA seq
DB search
MRFGLLGTLTAHDGVADRPVQGPKARTLLAVLLLNADRPVSLDRLLDALWGDRPPATAEA
SLRNLVSRLRRTLGDEDGQRLRSTPSGYQLSLTDDELDTRQFEAAIRRARSAHEAGDLSA
VLAETATALGLWRGEPLADLPEAAGGGAAAEQWRESRLQALEWRFDAELGLGRPHAPLPE
LTRLVREHPLREVFHAQLMLALHLTGSRARALEVHQRLRTALIEELGIEPGPTVRAAHQR
ILAEPPTEPSNPAEQAEQSAEAAEAAKAATEAPPAPAATLSADRPRPSQLPLVSPYFVGR
QEQLATLRDALTDTSEQPAIVVVSGLAGVGKSALAVRCATDLRGEFPDGQLFLNLRGATP
GLTPLTAHAALTALLPALDAARGGVPEDTDGAAALLRTALAGTRTLLVLDDAADLAQVRP
LLPTAPGCAVLVTSRSPMHALDHALHLRLDVLSEHDGIALVERAAGRTSADRSVVAIERT
DLARLVRLCGRHPLALRIAGARLAARRTLPVRHLVGRLEEHEDRLDELELDDLSIRRSLA
LTYDSLRGSARRPDVRAAAALAAIGTLDLPDYSAPLLAAVLRITPAQAATALDRLVEVAL
LDEPRPDRYAPHDLVRDYARELVPDPADRTGHVRAALDWYRSLTVRMAFALDPGSALTRE
LPPVAPADQLDHEGALAAGDAEFGNLLLLVEQLTATNWATSAEVSPLARALFPYLRVRPH
ADALRMNGIVQRLAVRDGDLAAQAYALNSMAHAHYSAGRNVPALELLDACLAVAEDPDFR
RRALGHRGLVLSDMRRVEEAMASLQEVLDLAVRAGDDRDQASALVALGNLVEAEDPHLAI
AYHHRAIDAANRCGFEYATVAALCNIGFAHLRLDDPAEALRHFEQTTGSSLRIASWQINT
EVWRGRAEALRRLGRLNDALTVVRQLLDQAAPLQDALVTGTFQHTHGLILRDLGRPAEAR
AAWRSALERLSTADHPVVGELRDLLATG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcggtttgctcggcactctgacggcccatgacggagtggccgaccggccggtc
cagggccccaaagcccgtaccctgctggccgtcctgctgctgaacgccgaccggcccgtc
tcgctcgaccgcctgctcgacgcgctctggggcgaccggccccccgccaccgccgaagcc
tcgctgcgcaacctggtctcccggctgcgccggacactcggcgacgaggacggacagcga
ctgcggtccaccccgtccggctaccaactctcgctgacagacgacgagttggacactcga
cagttcgaggccgcgatccgccgggcccgctccgcgcacgaggccggcgacctgtccgcc
gtactggccgagaccgccaccgcactcggcctctggcgcggcgagccgctggccgacctc
ccggaggcggccgggggcggcgcggcggccgagcagtggcgggagagccgcctgcaggcc
ttggagtggcgcttcgacgccgagttgggcctgggccgcccgcacgcgccgctgcccgaa
ctcacccgcctggtccgcgagcacccgctgcgcgaggtcttccacgcccagctgatgctg
gccctgcacctgaccggctccagggcccgggccctggaggtgcaccagcgcctgcgcacc
gccctgatcgaggagttgggcatcgaacccggccccaccgtccgggccgcgcaccagcgg
atcctcgccgagccgccgaccgaaccgagcaacccagccgaacaggctgaacagtcggcc
gaggcggccgaggcggccaaggcggcaaccgaagcgccgcccgctccggccgccacgctc
tcggccgaccgcccaaggccgtcccaactcccgctcgtgtcaccgtacttcgttggacgc
caagagcaactggcaaccctccgggacgcgttgaccgacacctcggagcagcccgcgatc
gtcgtggtcagcggcctggccggcgtcggcaagtccgccctcgcggtgcgctgcgccacc
gacctgcggggcgagttcccggacgggcagctgttcctgaacctgcgcggcgccaccccc
ggcctgaccccgctcaccgcccacgccgcgctcaccgcgctgctgcccgccctcgacgcc
gcgcggggcggcgtccccgaggacaccgacggcgccgccgccctgctgcgcaccgccctg
gcaggcacccgcaccctgctcgtcctggacgacgcagccgacctcgcccaggtccgcccg
ctgctgccgaccgcccccggctgcgccgtcctggtcaccagccgctcccccatgcacgcc
ctggaccacgcgctgcacctgcggctggacgtcctctccgagcacgacggcatcgccctg
gtcgaacgcgccgccggccgcaccagtgcggaccggtcggtggtcgccatcgagcggacc
gacctggcccgcctggtccggctctgcggccggcacccgctcgccctgcggatcgccggc
gcccggctggccgcccgccgcaccctccccgtccggcacctggtcggccggctggaggag
cacgaggaccggctggacgagctcgaactcgacgacctgagcatccgccgctcgctcgcc
ctgacgtacgactcgctgcgcggctccgcccgccggccggacgtccgggccgccgccgcc
ctcgccgcgatcggcaccctcgacctccccgactactccgccccgctgctcgccgctgtc
ctgcggatcacccccgcccaggccgccaccgccctcgaccgcctggtcgaggtcgccctg
ctcgacgagccccgccccgaccggtacgccccgcacgacctggtccgcgactacgcccgc
gaactcgtccccgaccccgccgaccgcaccggccacgtccgggccgcgctcgactggtac
cgctcgctgaccgtccggatggccttcgccctcgaccccggctccgccctgacccgggag
ctgccgccggtcgcccccgccgaccagctggaccacgagggcgcgctggccgccggcgac
gccgagttcggcaacctgctgctcctggtcgaacagctcaccgccacgaactgggcgacc
tccgccgaggtctccccgctggcccgggcgctcttcccctacctgcgggtccgcccgcac
gcggacgcgctccggatgaacggaatcgtccagcgcctggcggtccgggacggcgacctg
gccgcccaggcgtacgcgctcaactccatggcccacgcccactactccgccggccggaac
gtccccgcgctcgaactcctcgacgcctgcctggcggtggccgaggacccggacttccgc
cgccgggccctcggccaccgcggcctcgtgctgtccgacatgcgccgcgtcgaggaggcg
atggccagcctgcaagaggtgctggacctcgccgtccgggccggtgacgaccgcgatcag
gccagcgccctcgtcgccctcggcaacctggtggaagccgaggacccgcacctggccatc
gcctaccaccaccgcgccatcgacgccgccaaccgctgcggcttcgagtacgcgaccgtc
gccgccctctgcaacatcggcttcgcccacctccggctggacgaccccgccgaggcgctg
cgccacttcgagcagaccaccggcagctccctgcggatcgcctcctggcagatcaacacc
gaggtctggcgcggccgggccgaggcactgcgccgcctgggccggctgaacgacgccctg
accgtcgtccggcaactgctcgaccaggccgcccccctccaggacgccctcgtcaccggc
accttccagcacacccacggcctgatcctgcgcgacctcggccgccccgccgaagcccgc
gccgcctggcgctccgccctggaacgcctcagcaccgccgaccacccggtggtcggcgaa
ctccgcgacctgctcgccaccggctga
DBGET
integrated database retrieval system
