Kitasatospora setae: KSE_37320
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Entry
KSE_37320 CDS
T01648
Symbol
sigN
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ksk
Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksk03021
]
KSE_37320 (sigN)
Transcription machinery [BR:
ksk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSE_37320 (sigN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_23
MarR_2
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
BAJ29533
UniProt:
E4NEA2
LinkDB
All DBs
Position
4147934..4148824
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AA seq
296 aa
AA seq
DB search
MFTEPGSAVIEADTEAGAEVGTEVEAVVVSLPAQTGPAEAPDRALDTRTLSRALFRRLAG
LESGSAEHTYVRDTLIELNLPLVRYASARFRSRNEPMEDIVQVGTIGLIKAIDRFDPDRG
VEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKAGDELSQRLDRSPTVPELA
AYLGVTEDDVVEGLAVGNAYTASSLDSTPAEDDGGDGPLADRLGYEDLALEGVEYRESLK
PLLAKLPPRERRIIMLRFFGNLTQSQIGEEIGISQMHVSRLLTKTLAHLRAGLTAE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgttcacagaaccgggcagtgcggtcatcgaagccgacaccgaagccggagccgaggtc
gggacggaggtcgaggccgtcgtcgtctcgctgccggcccagaccggtcccgccgaggcc
cccgaccgggcgctcgacacccgcacgctgtcccgcgcgctgttccgccggctggccggc
ctggagtccggcagcgcggagcacacctacgtccgggacaccctgatcgagctcaacctg
ccgctggtccggtacgcgtccgcgcgcttccgcagccgcaacgagccgatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggccatcgaccgcttcgacccggaccgcggc
gtcgagttccccaccttcgcgatgcccaccgtggtcggcgagatcaagcgcttcttccgc
gacaccagctggtcggtccgcgtcccgcgccgcctccaggagctccgcctcgccctcacc
aaggccggcgacgaactctcccagcgcctcgaccgctcccccaccgtccccgagctcgcc
gcctacctcggcgtgaccgaggacgacgtggtcgagggcctcgccgtcggcaacgcctac
accgccagctcgctcgactccacgcccgccgaggacgacggcggcgacggcccgctcgcc
gaccgcctcggctacgaggacctcgccctcgaaggcgtcgagtaccgcgagtcgctcaag
ccgctgctcgccaagctcccgccgcgcgagcgccggatcatcatgctgcgcttcttcggc
aacctgacgcagtcccagatcggcgaggagatcggcatctcccagatgcacgtctcccgc
ctgctcaccaagaccctcgcccacctccgcgcgggcctcaccgcggagtga
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