Kitasatospora setae: KSE_44110
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Entry
KSE_44110 CDS
T01648
Symbol
groL2
Name
(GenBank) putative 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSE_44110 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksk03019
]
KSE_44110 (groL2)
03110 Chaperones and folding catalysts [BR:
ksk03110
]
KSE_44110 (groL2)
03029 Mitochondrial biogenesis [BR:
ksk03029
]
KSE_44110 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksk04147
]
KSE_44110 (groL2)
Enzymes [BR:
ksk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KSE_44110 (groL2)
Messenger RNA biogenesis [BR:
ksk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KSE_44110 (groL2)
Chaperones and folding catalysts [BR:
ksk03110
]
Heat shock proteins
HSP60 / Chaperonin
KSE_44110 (groL2)
Mitochondrial biogenesis [BR:
ksk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KSE_44110 (groL2)
Exosome [BR:
ksk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KSE_44110 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
KSE_44110 (groL2)
Exosomal proteins of breast cancer cells
KSE_44110 (groL2)
Exosomal proteins of colorectal cancer cells
KSE_44110 (groL2)
Exosomal proteins of bladder cancer cells
KSE_44110 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
BAJ30194
UniProt:
E4NFB4
LinkDB
All DBs
Position
4876011..4877633
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVAAVSDQLLAQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDLERMEASFEDPYILIANSKISSVKDLLPLLEKVMQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGIDLLGTARKVVITKDETTIVDGGGDSDQVAGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
GVAFDKLELEGDEATGANIVRVALEAPIKQIATNAGLEGGVVVEKVRNLPAGHGLNAATN
EYVDLVASGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcctttgacgaggaagcccgccgcggccttgagcgtggcatgaac
cagcttgccgacgccgtgaaggtcacgctcggccccaagggtcgcaacgtcgtcctggag
aagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaggtcgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtccgc
gagggtctgcgcaacgtcgccgccggcgccaacccgatggccctcaagcgcggcatcgag
aaggccgtcgcggccgtctccgaccagctgctggcccaggccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctcggccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctggagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgccaccgacctggagcgcatggaggcgagcttcgaggacccgtacatcctcatc
gccaactccaagatctcctcggtcaaggacctcctcccgctgctggagaaggtcatgcag
agcggcaagccgctcgtcatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtgaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctgaccggcggcaccgtgatctcc
gaggaggtcggcctcaagctcgagaacgccggcatcgacctgctcggcaccgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggcggcggcgacagcgaccaggtc
gccggccgggtcaaccagatccgcgccgagatcgagaactccgactcggactacgaccgc
gagaagctccaggagcgcctcgccaagctggccggcggcgtggccgtcatcaaggccggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggcggcgtcgccctgctgcaggcc
ggtgtcgcgttcgacaagctggagctggagggcgacgaggccaccggtgccaacatcgtc
cgcgtggcgctcgaggccccgatcaagcagatcgcgaccaacgccggcctcgagggcggc
gtcgtggtcgagaaggtccgcaacctgcccgccggccacggcctgaacgccgcgaccaac
gagtacgtcgacctggtcgcctccggcatcatcgacccggccaaggtcacccgctccgcc
ctgcagaacgccgcctccatcgcggcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcggccgccggcggcggcatgccgggcggtgacatggacttc
tga
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